RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ODAMA1E959 279 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 FUOMA2VDF0 154 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 ZNF780AO75290 641 aaPredicted RBP10.33□□□□□ -0.76
LSM5-201ENST00000223084 CSN2P05814 226 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 IGHV1-8P0DP01 117 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 GTF2F2P13984 249 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 PAX6P26367 422 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 PSMB9P28065 219 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 GABRA5P31644 462 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 ACTG1P63261 375 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 GPR176Q14439 515 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 ATAD3CQ5T2N8 411 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 PRAMEF5Q5TYX0 476 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 UBE2UQ5VVX9 321 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 GLT8D1Q68CQ7 371 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 ZNF773Q6PK81 442 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 BAIAP2L2Q6UXY1 529 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 SUMF2Q8NBJ7 301 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 SPATA3Q8NHX4 192 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 AJUBAQ96IF1 538 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 CYYR1Q96J86 154 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 DPCDQ9BVM2 203 aaPredicted RBP10.33□□□□□ -0.76
LSM5-201ENST00000223084 KCNK15Q9H427 330 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 PCDHB16Q9NRJ7 776 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 KIF25Q9UIL4 384 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 AK6Q9Y3D8 172 aaKnown RBP10.33□□□□□ -0.76
LSM5-201ENST00000223084 CRTAPO75718 401 aaPredicted RBP10.32□□□□□ -0.76
LSM5-201ENST00000223084 IGHV4-59P01825 116 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 RNASE1P07998 156 aaKnown RBP10.32□□□□□ -0.76
LSM5-201ENST00000223084 MGMTP16455 207 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 OMGP23515 440 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 PSMA1P25786 263 aaKnown RBP10.32□□□□□ -0.76
LSM5-201ENST00000223084 CALRP27797 417 aaKnown RBP10.32□□□□□ -0.76
LSM5-201ENST00000223084 GDNFP39905 211 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 C1orf100Q5SVJ3 147 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 RSBN1Q5VWQ0 802 aaPredicted RBP10.32□□□□□ -0.76
LSM5-201ENST00000223084 OR10K2Q6IF99 312 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 CORO2AQ92828 525 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 FAM46BQ96A09 425 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 SELENOIQ9C0D9 397 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 SLITRK2Q9H156 845 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 NDUFB11Q9NX14 153 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 UBE2J1Q9Y385 318 aaPredicted RBP10.32□□□□□ -0.76
LSM5-201ENST00000223084 SESN1Q9Y6P5 492 aa10.32□□□□□ -0.76
LSM5-201ENST00000223084 MEIKINA0A087WXM9 373 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 FAM172BPA6NC97 362 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 CLDN34H7C241 214 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 ARL6IP5O75915 188 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 CLPXO76031 633 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 MPIG6BO95866 241 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 PAHP00439 452 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 RBP4P02753 201 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 ARG1P05089 322 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 FBP1P09467 338 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 GLP1RP43220 463 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 IER3P46695 156 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 DYNC1I2Q13409 638 aaKnown RBP10.31□□□□□ -0.76
LSM5-201ENST00000223084 P2RY14Q15391 338 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 MPV17LQ2QL34 196 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 MIDNQ504T8 468 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 LHFPL4Q7Z7J7 247 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 LINC00596Q86U02 117 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 LDLRAD3Q86YD5 345 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 OR13A1Q8NGR1 328 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 OR13D1Q8NGV5 346 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 GCDHQ92947 438 aaPredicted RBP10.31□□□□□ -0.76
LSM5-201ENST00000223084 SLC25A28Q96A46 364 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 FOXRED1Q96CU9 486 aaPredicted RBP10.31□□□□□ -0.76
LSM5-201ENST00000223084 BARHL1Q9BZE3 327 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 CHIAQ9BZP6 476 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 IFT22Q9H7X7 185 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 TAS2R3Q9NYW6 316 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
LSM5-201ENST00000223084 SHISA3A0PJX4 238 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 CCRL2O00421 344 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 SLC22A1O15245 554 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 CGB3P0DN86 165 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 CGB7P0DN87 165 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 VSIG8P0DPA2 414 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 CD37P11049 281 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 CDK2P24941 298 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 HTR2CP28335 458 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 LGALS4P56470 323 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 C17orf58Q2M2W7 97 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 KCTD21Q4G0X4 260 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 LDLRAD2Q5SZI1 272 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 UTF1Q5T230 341 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 SIGIRRQ6IA17 410 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 C16orf87Q6PH81 154 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 CD200R1LQ6Q8B3 271 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 MRGPRDQ8TDS7 321 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 NEK7Q8TDX7 302 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 SSMEM1Q8WWF3 244 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 FCGR1BQ92637 280 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 MRPS24Q96EL2 167 aaKnown RBP10.3□□□□□ -0.76
LSM5-201ENST00000223084 Q96M66 194 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 GAL3ST2Q9H3Q3 398 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 ZMAT3Q9HA38 289 aaKnown RBP10.3□□□□□ -0.76
LSM5-201ENST00000223084 OR6C3Q9NZP0 311 aa10.3□□□□□ -0.76
LSM5-201ENST00000223084 IGHV2-26A0A0B4J1V2 119 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms