RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 PLEKHA2Q9HB19 425 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 FSCN3Q9NQT6 498 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 GFOD1Q9NXC2 390 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 PLEK2Q9NYT0 353 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 PPP4R1LQ9P1A2 415 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 OR5H1A6NKK0 313 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SERPINE3A8MV23 424 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SCGNO76038 276 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SCTP09683 121 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 CCL2P13500 99 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 TUBG1P23258 451 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 ARL4DP49703 201 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 ZNF41P51814 821 aaPredicted RBP5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 AFF3P51826 1226 aaKnown RBP5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 RPL23AP62750 156 aaKnown RBP5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 NKX6-1P78426 367 aaPredicted RBP5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 HOXA4Q00056 320 aaPredicted RBP5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 C17orf67Q0P5P2 114 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 HMGN3Q15651 99 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 ZNF726P1Q15940 193 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 KIAA0895LQ68EN5 471 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 C1QL4Q86Z23 238 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 ZNF664Q8N3J9 261 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SPEM1Q8N4L4 309 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 TMEM252Q8N6L7 170 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 CLDND2Q8NHS1 167 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 GATAD1Q8WUU5 269 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 TMEM234Q8WY98 164 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SCGB3A2Q96PL1 93 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 IER2Q9BTL4 223 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SLC25A31Q9H0C2 315 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 C11orf1Q9H5F2 150 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 SLC7A10Q9NS82 523 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 USF3Q68DE3 2245 aa5.03□□□□□ -1.6
CEACAM1-201ENST00000161559 MUC6Q6W4X9 2439 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 IGHV3-64DA0A0J9YX35 117 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 M0R135 149 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ST8SIA5O15466 376 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 CHST1O43916 411 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 CNOT4O95628 575 aaKnown RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 FASLGP48023 281 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 RBP2P50120 134 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 PPA1Q15181 289 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 FAM90A2PQ658T7 463 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 SLC16A14Q7RTX9 510 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 TBC1D26Q86UD7 250 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 THNSL2Q86YJ6 484 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 NABP1Q96AH0 204 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ZNF799Q96GE5 643 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ALKBH3Q96Q83 286 aaPredicted RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 PBDC1Q9BVG4 233 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 TM2D1Q9BX74 207 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 METTL7AQ9H8H3 244 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 FGF21Q9NSA1 209 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ST3GAL6Q9Y274 331 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 HS3ST3A1Q9Y663 406 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 C3orf85A0A1B0GTC6 90 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 A0A1W2PPC4 97 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ZNF705GA8MUZ8 300 aaPredicted RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 OR7C1O76099 320 aaPredicted RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 OR4A8P0C604 315 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 GZMBP10144 247 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 GZMHP20718 246 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 GALNSP34059 522 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 MAS1LP35410 378 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 TSPAN7P41732 249 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ERVS71-1P61550 626 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 GNB2P62879 340 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ZXDAP98168 799 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 HERPUD1Q15011 391 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 OR8G1Q15617 311 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 USF2Q15853 346 aaPredicted RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 ZNF124Q15973 351 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 SSX2Q16385 188 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 FAM53AQ6NSI3 398 aaPredicted RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 DPPA2Q7Z7J5 298 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 LGI3Q8N145 548 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 GAPTQ8N292 157 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 PLPPR1Q8TBJ4 325 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 FAM210BQ96KR6 192 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 DECR2Q9NUI1 292 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 NECAP2Q9NVZ3 263 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 MMP17Q9ULZ9 603 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 WASF3Q9UPY6 502 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 MMACHCQ9Y4U1 282 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 MED12LQ86YW9 2145 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 PIEZO1Q92508 2521 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 A0A1W2PNV4 684 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 BCAT2O15382 392 aaPredicted RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 PPYP01298 95 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 IGLV3-1P01715 115 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 B4GALT1P15291 398 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 GLIPR1P48060 266 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 PAX9P55771 341 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 MLF1P58340 268 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 Q6ZRM9 215 aa5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 NFAM1Q8NET5 270 aaPredicted RBP5.02□□□□□ -1.61
CEACAM1-201ENST00000161559 OR5T1Q8NG75 326 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms