RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 UBE2ZQ9H832 354 aaPredicted RBP9.11□□□□□ -0.95
CX3CL1-201ENST00000006053 ASCL3Q9NQ33 180 aa9.11□□□□□ -0.95
CX3CL1-201ENST00000006053 EXPH5Q8NEV8 1989 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 IGLV3-32A0A0A0MS00 114 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 IGKV1-12A0A0C4DH73 117 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 ZNF724A8MTY0 619 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 IGKV1D-12P01611 117 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 FABP4P15090 132 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 RND3P61587 244 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 VAMP2P63027 116 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 ZNF266Q14584 549 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 CNN3Q15417 329 aaKnown RBP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 RABEPKQ7Z6M1 372 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 ZNF695Q8IW36 515 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 OSR2Q8N2R0 312 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 CCDC71LQ8N9Z2 235 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 SMRP1Q8NCR6 262 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 RNF138Q8WVD3 245 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 SPSB1Q96BD6 273 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 AKIRIN1Q9H9L7 192 aaPredicted RBP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 HSF4Q9ULV5 492 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 TMED3Q9Y3Q3 217 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 EML6Q6ZMW3 1958 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 OR7C1O76099 320 aaPredicted RBP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 RUNX1Q01196 453 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 LRTM2Q8N967 370 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 CPEB3Q8NE35 698 aaKnown RBP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 OR5C1Q8NGR4 320 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 MUCL1Q96DR8 90 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 P4HTMQ9NXG6 502 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 DOK5Q9P104 306 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 IGLV3-12A0A075B6K2 115 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 C3orf85A0A1B0GTC6 90 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 NRASP01111 189 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 OTX1P32242 354 aaPredicted RBP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 MALLQ13021 153 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 TRA2AQ13595 282 aaKnown RBP eCLIP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 CXorf66Q5JRM2 361 aaPredicted RBP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 C10orf128Q5T292 105 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 MAML2Q8IZL2 1156 aaPredicted RBP9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 OR4D5Q8NGN0 318 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 PIGCQ92535 297 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 MOB3AQ96BX8 217 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 TMEM208Q9BTX3 173 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 ANGPTL4Q9BY76 406 aa9.1□□□□□ -0.95
CX3CL1-201ENST00000006053 MPPED1O15442 326 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 HSPA12AO43301 675 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 PPYP01298 95 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 CXCL1P09341 107 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 CD200P41217 278 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 DLK1P80370 383 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 LPAL2Q16609 132 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 GFI1BQ5VTD9 330 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 ZNF574Q6ZN55 896 aaPredicted RBP9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 ZNF429Q86V71 674 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 KMT5CQ86Y97 462 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 CYB561D1Q8N8Q1 229 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 TMEM171Q8WVE6 324 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 TMEM54Q969K7 222 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 CCDC74BQ96LY2 380 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 TP53I11O14683 189 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 TNFSF11O14788 317 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 DLEU1O43261 78 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 JMJD7P0C870 316 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 HIKESHIQ53FT3 197 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 Q8WTZ3 238 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 NTNG2Q96CW9 530 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 C10orf35Q96D05 121 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 RARRES3Q9UL19 164 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 DMDP11532 3685 aa9.09□□□□□ -0.95
CX3CL1-201ENST00000006053 PRRC2CQ9Y520 2896 aaKnown RBP9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 LOC102725191A0A1B0GVB3 256 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 A6NNC1 897 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 ADAM20O43506 726 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 LMO1P25800 156 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 GNRHRP30968 328 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 DYNLT3P51808 116 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 PLCXD3Q63HM9 321 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 THNSL2Q86YJ6 484 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 GPR137CQ8N3F9 429 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM252Q8N6L7 170 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 FADS6Q8N9I5 356 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 SEMA5BQ9P283 1151 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 CHCHD2Q9Y6H1 151 aaPredicted RBP9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TNRC18O15417 2968 aaPredicted RBP9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TGIF2-C20orf24A0A0A6YYL0 155 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF705GA8MUZ8 300 aaPredicted RBP9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TRDCB7Z8K6 153 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 PPP1R2P9O14990 202 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 CYB5BO43169 146 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TNFSF12O43508 249 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 SRP19P09132 144 aaKnown RBP9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 B4GALT1P15291 398 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 H3F3AP84243 136 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 AKR1C8PQ5T2L2 129 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 WDR74Q6RFH5 385 aaPredicted RBP9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 LHFPL2Q6ZUX7 228 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TBC1D26Q86UD7 250 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms