RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Olfr994Q8VF73 314 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Cela1Q91X79 266 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Znf281Q99LI5 893 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 NtmQ99PJ0 344 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 PigcQ9CXR4 297 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 MrnipQ9D1F5 335 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gpx8Q9D7B7 209 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 1700025F22RikQ9D9Y7 111 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm13769A2ATW2 309 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr427E9Q7E7 315 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Casp6O08738 276 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 AgrpP56473 131 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 A4gntQ14BT6 341 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Rasl2-9Q61820 216 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Parp16Q7TMM8 322 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Enkd1Q7TSV9 346 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ubqln3Q8C5U9 658 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Eddm3bQ8K0E4 149 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1132Q8VG97 308 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Scgb3a2Q920H1 91 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 DohhQ99LN9 302 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc29a3Q99P65 475 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Fdx2Q9CPW2 174 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 2610524H06RikQ9CZU9 139 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 4933407L21RikQ9D476 131 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm13547A2ARC0 163 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Cisd3B1AR13 137 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Chek1O35280 476 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Scd2P13011 358 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Tnfrsf1aP25118 454 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr323Q5NCD0 323 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 CenpoQ8K015 298 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 IdnkQ8R0J8 184 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 GcaQ8VC88 220 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 CthQ8VCN5 398 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr156Q8VGA9 318 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Prb1Q91X93 504 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mpped1Q91ZG2 326 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Oaz3Q9R109 243 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Htr6Q9R1C8 440 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm7697A0A0J9YUH2 350 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm9495A0A0J9YUZ3 350 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm5286E0CXI6 357 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm21783J3QM57 227 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Vmn1r57K7N731 310 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 PhyhO35386 338 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Klk1b1P00755 261 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 PlauP06869 433 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 GzmfP08883 248 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Timp1P12032 205 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Sdc1P18828 311 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Lsm6P62313 80 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 MpgQ04841 333 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 4933415F23RikQ14BX6 153 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1031Q7TR87 336 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1000Q7TR99 314 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 QpctlQ8BH73 383 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Adamts4Q8BNJ2 833 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Pqlc2Q8C4N4 293 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Naa40Q8VE10 237 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ykt6Q9CQW1 198 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Utp23Q9CX11 249 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Plscr3Q9JIZ9 296 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gabrg1Q9R0Y8 465 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 P01808 119 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Nme1P15532 152 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Egfbp2P36368 261 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Spin2cQ6NVE3 257 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1058Q7TR74 316 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 GgnQ80WJ1 673 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Fbxo46Q8BG80 603 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Sf3b5Q923D4 86 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Dnaja3Q99M87 480 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Eif3fQ9DCH4 361 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Lhx9Q9WUH2 397 aa9.2□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Vmn1r67G5E8C1 305 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr936J3KMV2 267 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mtatp6P00848 226 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Bmp5P49003 452 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Pcbp4P57724 403 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Rab1AP62821 205 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Crebl2Q32M00 123 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Zfp974Q3UVF6 752 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Adprhl1Q8BGK2 353 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc17a5Q8BN82 495 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ube3dQ8BX13 368 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1324Q8VEU7 332 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Rnps1Q99M28 305 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mrps16Q9CPX7 135 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Med30Q9CQI9 178 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Iqcf5Q9DAL7 148 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ldb3Q9JKS4 723 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Angptl4Q9Z1P8 410 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Trav12n-2A0A075B626 113 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ankrd29D3YVV3 309 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ccdc71lE9Q4T4 218 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 H2al1oL7MU04 110 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 OtpO09113 325 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Foxd2O35392 492 aa9.19□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Adrb2P18762 418 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms