RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Q3V0E1 1183 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Tmem127Q8BGP5 238 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Klre1Q8CJC7 226 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 GmppaQ922H4 420 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 P01804 111 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Sirt6P59941 334 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Rnf133Q14B02 382 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Flywch1Q8CI03 673 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Esp38A8R0X1 80 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 5430403G16RikD3Z5L4 667 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Gm28305F6U473 122 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Cd200O54901 278 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Hoxd1Q01822 328 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Dus4lQ32M08 324 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 CybaQ61462 192 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr1446Q8VFX4 308 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Hdhd3Q9CYW4 251 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Cyhr1Q9QXA1 311 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Tmem235B1AQL3 211 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Cdk2ap1O35207 114 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Nkx3-1P97436 237 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Kirrel2Q7TSU7 700 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Atg101Q9D8Z6 218 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Iqcf5Q9DAL7 148 aa12.66□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Gm6880A3KG45 208 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 1810011H11RikE9PVZ2 95 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Tcstv1O70619 171 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 H2-LP01897 362 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 PjvkQ0ZLH2 352 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 H2-T22Q31615 379 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 SpxD3Z752 116 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Nxpe5E0CX47 564 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 FhitO89106 150 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Ifna4P07351 186 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Col19a1Q0VF58 1136 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Spock3Q8BKV0 436 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Abhd17cQ8VCV1 320 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr215Q8VF82 310 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr1201Q8VGF5 307 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr228A0A1L1SR98 313 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Vmn1r152E9Q9N3 307 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Pcsk6F6XJP7 959 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Vmn1r104L7N293 307 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Dscr3O35075 297 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Crisp2P16563 243 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 H2-DMaP28078 261 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Slc25a31Q3V132 320 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Elavl4Q61701 385 aaKnown RBP12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Msl2Q69ZF8 577 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 B3gnt8Q8R3I9 389 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr992Q8VGC6 309 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 RetnlaQ9EP95 111 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Cml1Q9JIZ0 222 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Aloxe3Q9WV07 711 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Slc25a34A2ADF7 318 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 4930467E23RikD3Z1P8 350 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Gm15319E9Q637 350 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr1537P34983 314 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Try10Q792Z1 246 aaKnown RBP12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Gm21119Q8C646 350 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Sertm1Q8CD78 107 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr1453Q8VFX0 307 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Gm4177D3YTX5 305 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr653E9PVA0 317 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Vmn1r168K7N6B6 309 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Vmn1r103K7N6X7 305 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Vmn1r151L7N288 305 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 GusbP12265 648 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Fgf2P15655 154 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Gnb2P62880 340 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Arg1Q61176 323 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Hdac8Q8VH37 377 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Sectm1aQ921W8 192 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Col2a1P28481 1487 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Gm45753A0A1C7CYU8 86 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Emg1O35130 244 aaKnown RBP12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Rps23P62267 143 aaKnown RBP12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Adra1aP97718 466 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Defa23Q5G866 93 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Slc35e3Q6PGC7 313 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Fbll1Q80WS3 314 aaKnown RBP12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Ntng2Q8R4F1 589 aaKnown RBP12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Olfr1445Q8VFW9 314 aa12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Usp3Q91W36 520 aaKnown RBP12.65□□□□□ -0.38
Col5a1-201ENSMUST00000028280 Vmn1r57K7N731 310 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 P01641 117 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Hoxc11P31313 304 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Olfr13P34984 310 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Pafah1b3Q61205 232 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 DbhQ64237 622 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Chst14Q80V53 376 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Znf8Q8BGV5 572 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 9030612E09RikQ8CE20 140 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Q9CR34 168 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Kcnmb2Q9CZM9 235 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Olfr122W4VSP0 330 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Plxnb2B2RXS4 1842 aa12.65□□□□□ -0.39
Col5a1-201ENSMUST00000028280 PvrigA0A1B0GS01 234 aa12.64□□□□□ -0.39
Col5a1-201ENSMUST00000028280 1810010D01RikA0A1L1SR87 51 aa12.64□□□□□ -0.39
Col5a1-201ENSMUST00000028280 Chst13D3Z6E3 336 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms