RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W RRP14P36080 434 aaKnown RBP3.61□□□□□ -1.83
DDR48YMR173W SET3P36124 751 aa3.61□□□□□ -1.83
DDR48YMR173W GMH1P36125 273 aa3.61□□□□□ -1.83
DDR48YMR173W DOT6P40059 670 aaKnown RBP3.61□□□□□ -1.83
DDR48YMR173W COX18P53239 316 aa3.61□□□□□ -1.83
DDR48YMR173W CHS5Q12114 671 aaKnown RBP3.61□□□□□ -1.83
DDR48YMR173W ECM3Q99252 613 aa3.61□□□□□ -1.83
DDR48YMR173W ABF1P14164 731 aa3.6□□□□□ -1.83
DDR48YMR173W NUP1P20676 1076 aa3.6□□□□□ -1.83
DDR48YMR173W RGT1P32862 1170 aa3.6□□□□□ -1.83
DDR48YMR173W AIM14P53109 570 aa3.6□□□□□ -1.83
DDR48YMR173W POM34Q12445 299 aa3.6□□□□□ -1.83
DDR48YMR173W RPA135P22138 1203 aaKnown RBP3.59□□□□□ -1.83
DDR48YMR173W KCC4P25389 1037 aa3.59□□□□□ -1.83
DDR48YMR173W FEN2P25621 512 aaKnown RBP3.59□□□□□ -1.83
DDR48YMR173W PET127P32606 800 aa3.59□□□□□ -1.83
DDR48YMR173W CTP1P38152 299 aa3.59□□□□□ -1.83
DDR48YMR173W MAL31P38156 614 aa3.59□□□□□ -1.83
DDR48YMR173W MGS1P40151 587 aa3.59□□□□□ -1.83
DDR48YMR173W YGR151CP53287 111 aa3.59□□□□□ -1.83
DDR48YMR173W GPD1Q00055 391 aaKnown RBP3.59□□□□□ -1.83
DDR48YMR173W FMP30Q02883 468 aa3.59□□□□□ -1.83
DDR48YMR173W ERG20P08524 352 aaKnown RBP3.58□□□□□ -1.84
DDR48YMR173W MSS1P32559 526 aaPredicted RBP3.58□□□□□ -1.84
DDR48YMR173W YMC2P38087 329 aa3.58□□□□□ -1.84
DDR48YMR173W NUG1P40010 520 aaKnown RBP3.58□□□□□ -1.84
DDR48YMR173W YNL195CP40168 261 aa3.58□□□□□ -1.84
DDR48YMR173W BIT61P47041 543 aa3.58□□□□□ -1.84
DDR48YMR173W MPS3P47069 682 aa3.58□□□□□ -1.84
DDR48YMR173W MET13P53128 600 aa3.58□□□□□ -1.84
DDR48YMR173W YNL193WP53870 558 aa3.58□□□□□ -1.84
DDR48YMR173W YDL086WQ07505 273 aa3.58□□□□□ -1.84
DDR48YMR173W FRS1P15624 595 aaKnown RBP3.57□□□□□ -1.84
DDR48YMR173W APN1P22936 367 aa3.57□□□□□ -1.84
DDR48YMR173W YHR202WP38887 602 aa3.57□□□□□ -1.84
DDR48YMR173W MIT1P40002 666 aa3.57□□□□□ -1.84
DDR48YMR173W KHA1P40309 873 aa3.57□□□□□ -1.84
DDR48YMR173W SPC98P53540 846 aa3.57□□□□□ -1.84
DDR48YMR173W TFB2Q02939 513 aa3.57□□□□□ -1.84
DDR48YMR173W YSH1Q06224 779 aaPredicted RBP3.57□□□□□ -1.84
DDR48YMR173W ISA1Q07821 250 aaPredicted RBP3.57□□□□□ -1.84
DDR48YMR173W STE12P13574 688 aa3.56□□□□□ -1.84
DDR48YMR173W KIN82P25341 720 aa3.56□□□□□ -1.84
DDR48YMR173W NTH1P32356 751 aa3.56□□□□□ -1.84
DDR48YMR173W KSP1P38691 1029 aaKnown RBP3.56□□□□□ -1.84
DDR48YMR173W RFX1P48743 811 aa3.56□□□□□ -1.84
DDR48YMR173W SNF12P53628 566 aa3.56□□□□□ -1.84
DDR48YMR173W YFT2Q06676 274 aa3.56□□□□□ -1.84
DDR48YMR173W VPS36Q06696 566 aa3.56□□□□□ -1.84
DDR48YMR173W GUD1Q07729 489 aa3.56□□□□□ -1.84
DDR48YMR173W VHS3Q08438 674 aa3.56□□□□□ -1.84
DDR48YMR173W GEP3Q08622 556 aa3.56□□□□□ -1.84
DDR48YMR173W RKI1Q12189 258 aa3.56□□□□□ -1.84
DDR48YMR173W ADE5,7P07244 802 aaKnown RBP3.55□□□□□ -1.84
DDR48YMR173W SWI6P09959 803 aa3.55□□□□□ -1.84
DDR48YMR173W SAT4P25333 603 aaKnown RBP3.55□□□□□ -1.84
DDR48YMR173W IMG2P25642 146 aaPredicted RBP3.55□□□□□ -1.84
DDR48YMR173W YMC1P32331 307 aa3.55□□□□□ -1.84
DDR48YMR173W YHR097CP38809 366 aaKnown RBP3.55□□□□□ -1.84
DDR48YMR173W YIL077CP40508 320 aa3.55□□□□□ -1.84
DDR48YMR173W MEP2P41948 499 aa3.55□□□□□ -1.84
DDR48YMR173W ALG12P53730 551 aa3.55□□□□□ -1.84
DDR48YMR173W IZH3Q07959 543 aa3.55□□□□□ -1.84
DDR48YMR173W PHO5P00635 467 aa3.54□□□□□ -1.84
DDR48YMR173W IME1P21190 360 aa3.54□□□□□ -1.84
DDR48YMR173W MBR1P23493 339 aa3.54□□□□□ -1.84
DDR48YMR173W YKU70P32807 602 aa3.54□□□□□ -1.84
DDR48YMR173W APL3P38065 1025 aa3.54□□□□□ -1.84
DDR48YMR173W COS111P38308 924 aa3.54□□□□□ -1.84
DDR48YMR173W RET2P43621 546 aa3.54□□□□□ -1.84
DDR48YMR173W TAX4P47030 604 aa3.54□□□□□ -1.84
DDR48YMR173W HFD1Q04458 532 aa3.54□□□□□ -1.84
DDR48YMR173W VBA4Q04602 768 aaKnown RBP3.54□□□□□ -1.84
DDR48YMR173W NOP14Q99207 810 aaKnown RBP3.54□□□□□ -1.84
DDR48YMR173W RPL8AP17076 256 aaKnown RBP3.53□□□□□ -1.84
DDR48YMR173W SEC15P22224 910 aa3.53□□□□□ -1.84
DDR48YMR173W PRP22P24384 1145 aaKnown RBP3.53□□□□□ -1.84
DDR48YMR173W UGP1P32861 499 aaKnown RBP3.53□□□□□ -1.84
DDR48YMR173W YKR075CP36155 307 aa3.53□□□□□ -1.84
DDR48YMR173W PMC1P38929 1173 aaPredicted RBP3.53□□□□□ -1.84
DDR48YMR173W YPL068CQ02749 293 aa3.53□□□□□ -1.84
DDR48YMR173W YDR179W-AQ03983 463 aa3.53□□□□□ -1.84
DDR48YMR173W UFO1Q04511 668 aa3.53□□□□□ -1.84
DDR48YMR173W LAM4P38800 1345 aa3.52□□□□□ -1.85
DDR48YMR173W TPK2P06245 380 aa3.52□□□□□ -1.85
DDR48YMR173W CKB2P38930 258 aa3.52□□□□□ -1.85
DDR48YMR173W CCT5P40413 562 aaKnown RBP3.52□□□□□ -1.85
DDR48YMR173W PMT6P42934 759 aa3.52□□□□□ -1.85
DDR48YMR173W SPO1P53541 631 aa3.52□□□□□ -1.85
DDR48YMR173W STP1Q00947 519 aa3.52□□□□□ -1.85
DDR48YMR173W RCR2Q03446 210 aaKnown RBP3.52□□□□□ -1.85
DDR48YMR173W YMR210WQ03649 449 aa3.52□□□□□ -1.85
DDR48YMR173W PPN1Q04119 674 aa3.52□□□□□ -1.85
DDR48YMR173W HLR1Q04429 423 aa3.52□□□□□ -1.85
DDR48YMR173W UTP14Q04500 899 aaKnown RBP3.52□□□□□ -1.85
DDR48YMR173W YLR407WQ06070 228 aa3.52□□□□□ -1.85
DDR48YMR173W BUD8P41698 603 aa3.51□□□□□ -1.85
DDR48YMR173W ASN1P49089 572 aaKnown RBP3.51□□□□□ -1.85
DDR48YMR173W NMA2P53204 395 aa3.51□□□□□ -1.85
DDR48YMR173W RNH70P53331 553 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms