RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.26	□□□□□ -0.77	not detected
SAM1	YLR180W	PCH2	P38126	564 aa		10.26	□□□□□ -0.77
SAM1	YLR180W	GIP1	P38229	639 aa		10.26	□□□□□ -0.77
SAM1	YLR180W	SMC2	P38989	1170 aa	Known RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	YIL161W	P40449	235 aa	Known RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	SHQ1	P40486	507 aa	Predicted RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	RMD8	P43620	662 aa		10.26	□□□□□ -0.77
SAM1	YLR180W	DAS1	P47005	663 aa		10.26	□□□□□ -0.77
SAM1	YLR180W	COS5	P47187	383 aa		10.26	□□□□□ -0.77
SAM1	YLR180W	CEG1	Q01159	459 aa	Predicted RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	VPS60	Q03390	229 aa		10.26	□□□□□ -0.77
SAM1	YLR180W	JIP5	Q06214	492 aa	Predicted RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	TSR1	Q07381	788 aa	Known RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	CWC2	Q12046	339 aa	Predicted RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	YPR027C	Q12079	277 aa		10.26	□□□□□ -0.77
SAM1	YLR180W	MCX1	P38323	520 aa	Predicted RBP	10.25	□□□□□ -0.77
SAM1	YLR180W	TIF5	P38431	405 aa	Known RBP	10.25	□□□□□ -0.77
SAM1	YLR180W	FTR1	P40088	404 aa		10.25	□□□□□ -0.77
SAM1	YLR180W	ATG3	P40344	310 aa		10.25	□□□□□ -0.77
SAM1	YLR180W	FIG4	P42837	879 aa		10.25	□□□□□ -0.77
SAM1	YLR180W	APT1	P49435	187 aa	Known RBP	10.25	□□□□□ -0.77
SAM1	YLR180W	UME1	Q03010	460 aa		10.25	□□□□□ -0.77
SAM1	YLR180W	SEG1	Q04279	960 aa		10.25	□□□□□ -0.77
SAM1	YLR180W	OPY2	Q06810	360 aa		10.25	□□□□□ -0.77
SAM1	YLR180W	CHS1	P08004	1131 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	MTF2	P10849	440 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	RRP43	P25359	394 aa	Predicted RBP	10.24	□□□□□ -0.77
SAM1	YLR180W	TRK2	P28584	889 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	SDS3	P40505	327 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	VPS70	P47161	811 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	YNL011C	P53980	444 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	GIR2	Q03768	265 aa	Predicted RBP	10.24	□□□□□ -0.77
SAM1	YLR180W	YPR078C	Q06813	372 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	SAM3	Q08986	587 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	YOL098C	Q12496	1037 aa		10.24	□□□□□ -0.77
SAM1	YLR180W	SPO12	P17123	173 aa		10.23	□□□□□ -0.77
SAM1	YLR180W	PET123	P17558	318 aa		10.23	□□□□□ -0.77
SAM1	YLR180W	KIN3	P22209	435 aa		10.23	□□□□□ -0.77
SAM1	YLR180W	YEL043W	P32618	956 aa		10.23	□□□□□ -0.77
SAM1	YLR180W	FRE1	P32791	686 aa		10.23	□□□□□ -0.77
SAM1	YLR180W	STO1	P34160	861 aa	Known RBP	10.23	□□□□□ -0.77
SAM1	YLR180W	MUB1	Q03162	620 aa		10.23	□□□□□ -0.77
SAM1	YLR180W	RLP24	Q07915	199 aa	Known RBP	10.23	□□□□□ -0.77
SAM1	YLR180W	IRA1	P18963	3092 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	PPR1	P07272	904 aa	Predicted RBP	10.22	□□□□□ -0.77
SAM1	YLR180W	PPX1	P38698	397 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	TCD1	P38756	429 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	KAP123	P40069	1113 aa	Known RBP	10.22	□□□□□ -0.77
SAM1	YLR180W	EFM4	P40516	257 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	TOF2	Q02208	771 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	DON1	Q05610	365 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	FAL1	Q12099	399 aa	Known RBP	10.22	□□□□□ -0.77
SAM1	YLR180W	SFI1	Q12369	946 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	YDL206W	Q12424	762 aa		10.22	□□□□□ -0.77
SAM1	YLR180W	FPR1	P20081	114 aa	Known RBP	10.21	□□□□□ -0.77
SAM1	YLR180W	DAL1	P32375	460 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	ATG12	P38316	186 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	YBR225W	P38321	900 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	RAD55	P38953	406 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	AVT2	P39981	480 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	NDC80	P40460	691 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	LCB2	P40970	561 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	TCB2	P48231	1178 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	YNR065C	P53751	1116 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	SML1	Q04964	104 aa		10.21	□□□□□ -0.77
SAM1	YLR180W	DPB3	P27344	201 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	HXT1	P32465	570 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	SRB4	P32569	687 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	GEM1	P39722	662 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	SEC9	P40357	651 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	MAL13	P53338	473 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	MTD1	Q02046	320 aa	Known RBP	10.2	□□□□□ -0.78
SAM1	YLR180W	TBF1	Q02457	562 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	YLR297W	Q05899	129 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	VAC14	Q06708	880 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	YDL129W	Q07555	291 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	MLH2	Q07980	695 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	MCM16	Q12262	181 aa		10.2	□□□□□ -0.78
SAM1	YLR180W	REV1	P12689	985 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	GUT1	P32190	709 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	XRS2	P33301	854 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	NIP100	P33420	868 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	GDH3	P39708	457 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	YIR007W	P40566	764 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	ERG10	P41338	398 aa	Known RBP	10.19	□□□□□ -0.78
SAM1	YLR180W	YJR054W	P47114	497 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	TIM8	P57744	87 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	CEF1	Q03654	590 aa	Predicted RBP	10.19	□□□□□ -0.78
SAM1	YLR180W	HPF1	Q05164	967 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	ECM22	Q05958	814 aa	Predicted RBP	10.19	□□□□□ -0.78
SAM1	YLR180W	DAS2	Q12084	232 aa		10.19	□□□□□ -0.78
SAM1	YLR180W	GAL10	P04397	699 aa		10.18	□□□□□ -0.78
SAM1	YLR180W	HSF1	P10961	833 aa		10.18	□□□□□ -0.78
SAM1	YLR180W	CHS2	P14180	963 aa		10.18	□□□□□ -0.78
SAM1	YLR180W	CKI1	P20485	582 aa		10.18	□□□□□ -0.78
SAM1	YLR180W	IME1	P21190	360 aa		10.18	□□□□□ -0.78
SAM1	YLR180W	RAD57	P25301	460 aa		10.18	□□□□□ -0.78
SAM1	YLR180W	EFB1	P32471	206 aa	Known RBP	10.18	□□□□□ -0.78
SAM1	YLR180W	SWI3	P32591	825 aa		10.18	□□□□□ -0.78
SAM1	YLR180W	RRP1	P35178	278 aa	Predicted RBP	10.18	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 91.8 ms