RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W PEX6P33760 1030 aa2.36□□□□□ -2.03
PFD1YJL179W APT2P36973 181 aa2.36□□□□□ -2.03
PFD1YJL179W YBR184WP38299 523 aa2.36□□□□□ -2.03
PFD1YJL179W CRP1P38845 465 aaKnown RBP2.36□□□□□ -2.03
PFD1YJL179W MNT3P40549 630 aa2.36□□□□□ -2.03
PFD1YJL179W UBP6P43593 499 aaKnown RBP2.36□□□□□ -2.03
PFD1YJL179W ZDS1P50111 915 aaKnown RBP2.36□□□□□ -2.03
PFD1YJL179W ERG13P54839 491 aaKnown RBP2.36□□□□□ -2.03
PFD1YJL179W ATP25Q03153 612 aa2.36□□□□□ -2.03
PFD1YJL179W YML020WQ03722 664 aa2.36□□□□□ -2.03
PFD1YJL179W RGC1Q06108 1083 aaKnown RBP2.36□□□□□ -2.03
PFD1YJL179W AI5_ALPHAQ9ZZX1 630 aa2.36□□□□□ -2.03
PFD1YJL179W TSC11P40061 1430 aa2.35□□□□□ -2.03
PFD1YJL179W TRM732Q03496 1420 aa2.35□□□□□ -2.03
PFD1YJL179W ABF1P14164 731 aa2.35□□□□□ -2.03
PFD1YJL179W PEX1P24004 1043 aa2.35□□□□□ -2.03
PFD1YJL179W RLP7P40693 322 aaKnown RBP2.35□□□□□ -2.03
PFD1YJL179W YTH1Q06102 208 aaPredicted RBP2.35□□□□□ -2.03
PFD1YJL179W MYO4P32492 1471 aa2.34□□□□□ -2.03
PFD1YJL179W YRF1-1P0CX20 1796 aa2.34□□□□□ -2.03
PFD1YJL179W YRF1-5P0CX21 1796 aa2.34□□□□□ -2.03
PFD1YJL179W YRF1-8P0CX22 1796 aa2.34□□□□□ -2.03
PFD1YJL179W VTH1P40438 1549 aa2.34□□□□□ -2.03
PFD1YJL179W VTH2P40890 1549 aa2.34□□□□□ -2.03
PFD1YJL179W DIF1O13577 133 aa2.34□□□□□ -2.03
PFD1YJL179W PRP28P23394 588 aa2.34□□□□□ -2.03
PFD1YJL179W ERG6P25087 383 aaKnown RBP2.34□□□□□ -2.03
PFD1YJL179W YEL1P34225 687 aa2.34□□□□□ -2.03
PFD1YJL179W JHD1P40034 492 aa2.34□□□□□ -2.03
PFD1YJL179W GET2P40056 285 aa2.34□□□□□ -2.03
PFD1YJL179W GID8P40208 455 aa2.34□□□□□ -2.03
PFD1YJL179W ERP6P53198 216 aa2.34□□□□□ -2.03
PFD1YJL179W YGR151CP53287 111 aa2.34□□□□□ -2.03
PFD1YJL179W TDA5Q06417 326 aaKnown RBP2.34□□□□□ -2.03
PFD1YJL179W STH1P32597 1359 aa2.34□□□□□ -2.04
PFD1YJL179W SNT2P53127 1403 aa2.34□□□□□ -2.04
PFD1YJL179W NUP159P40477 1460 aa2.33□□□□□ -2.04
PFD1YJL179W SNQ2P32568 1501 aaKnown RBP2.33□□□□□ -2.04
PFD1YJL179W TPK2P06245 380 aa2.33□□□□□ -2.04
PFD1YJL179W TUP1P16649 713 aa2.33□□□□□ -2.04
PFD1YJL179W RPL8BP29453 256 aaKnown RBP2.33□□□□□ -2.04
PFD1YJL179W SEC6P32844 805 aa2.33□□□□□ -2.04
PFD1YJL179W NMD5P46970 1048 aa2.33□□□□□ -2.04
PFD1YJL179W YDR514CQ04408 483 aa2.33□□□□□ -2.04
PFD1YJL179W RPO21P04050 1733 aaKnown RBP2.32□□□□□ -2.04
PFD1YJL179W MIP6P38760 659 aaKnown RBP2.32□□□□□ -2.04
PFD1YJL179W DUN1P39009 513 aa2.32□□□□□ -2.04
PFD1YJL179W SHR5P41912 237 aa2.32□□□□□ -2.04
PFD1YJL179W PIP2P52960 996 aa2.32□□□□□ -2.04
PFD1YJL179W ATP23P53722 227 aa2.32□□□□□ -2.04
PFD1YJL179W REC102Q02721 264 aa2.32□□□□□ -2.04
PFD1YJL179W ARG7Q04728 441 aa2.32□□□□□ -2.04
PFD1YJL179W YDR338CQ05497 695 aa2.32□□□□□ -2.04
PFD1YJL179W UBX5Q06682 500 aa2.32□□□□□ -2.04
PFD1YJL179W MET7Q08645 548 aa2.32□□□□□ -2.04
PFD1YJL179W MDM20Q12387 796 aaKnown RBP2.32□□□□□ -2.04
PFD1YJL179W BNI1P41832 1953 aa2.31□□□□□ -2.04
PFD1YJL179W RAD18P10862 487 aa2.31□□□□□ -2.04
PFD1YJL179W RNR1P21524 888 aaKnown RBP2.31□□□□□ -2.04
PFD1YJL179W BIT2P38346 545 aa2.31□□□□□ -2.04
PFD1YJL179W KSP1P38691 1029 aaKnown RBP2.31□□□□□ -2.04
PFD1YJL179W SNO3P43544 222 aa2.31□□□□□ -2.04
PFD1YJL179W ORC4P54791 529 aa2.31□□□□□ -2.04
PFD1YJL179W TAF7Q05021 590 aa2.31□□□□□ -2.04
PFD1YJL179W THI22Q06490 572 aa2.31□□□□□ -2.04
PFD1YJL179W FRE7Q12333 620 aa2.31□□□□□ -2.04
PFD1YJL179W LTE1P07866 1435 aa2.31□□□□□ -2.04
PFD1YJL179W NTE1Q04958 1679 aa2.31□□□□□ -2.04
PFD1YJL179W LEU2P04173 364 aaPredicted RBP2.3□□□□□ -2.04
PFD1YJL179W PHO2P07269 559 aa2.3□□□□□ -2.04
PFD1YJL179W BCS1P32839 456 aa2.3□□□□□ -2.04
PFD1YJL179W PIG2P40187 538 aa2.3□□□□□ -2.04
PFD1YJL179W ALG2P43636 503 aa2.3□□□□□ -2.04
PFD1YJL179W TY4A-JP47023 414 aa2.3□□□□□ -2.04
PFD1YJL179W NOP9P47077 666 aaKnown RBP2.3□□□□□ -2.04
PFD1YJL179W BNA2P47125 453 aa2.3□□□□□ -2.04
PFD1YJL179W YDL086WQ07505 273 aa2.3□□□□□ -2.04
PFD1YJL179W SPO75Q07798 868 aa2.3□□□□□ -2.04
PFD1YJL179W ULS1Q08562 1619 aa2.3□□□□□ -2.04
PFD1YJL179W MLP2P40457 1679 aa2.3□□□□□ -2.04
PFD1YJL179W SPO14P36126 1683 aa2.29□□□□□ -2.04
PFD1YJL179W PDR15Q04182 1529 aaKnown RBP2.29□□□□□ -2.04
PFD1YJL179W VPS15P22219 1454 aa2.29□□□□□ -2.04
PFD1YJL179W LAM4P38800 1345 aa2.29□□□□□ -2.04
PFD1YJL179W AAD3P25612 363 aa2.29□□□□□ -2.04
PFD1YJL179W CTP1P38152 299 aa2.29□□□□□ -2.04
PFD1YJL179W ATG36P46983 293 aa2.29□□□□□ -2.04
PFD1YJL179W AAT1Q01802 451 aa2.29□□□□□ -2.04
PFD1YJL179W YDR179W-AQ03983 463 aa2.29□□□□□ -2.04
PFD1YJL179W RKI1Q12189 258 aa2.29□□□□□ -2.04
PFD1YJL179W PDR12Q02785 1511 aa2.28□□□□□ -2.04
PFD1YJL179W GEA2P39993 1459 aaKnown RBP2.28□□□□□ -2.04
PFD1YJL179W GEA1P47102 1408 aaPredicted RBP2.28□□□□□ -2.04
PFD1YJL179W APL3P38065 1025 aa2.28□□□□□ -2.04
PFD1YJL179W YHR097CP38809 366 aaKnown RBP2.28□□□□□ -2.04
PFD1YJL179W PMT6P42934 759 aa2.28□□□□□ -2.04
PFD1YJL179W YGL117WP53133 265 aa2.28□□□□□ -2.04
PFD1YJL179W CPR8P53728 308 aa2.28□□□□□ -2.04
PFD1YJL179W NAN1Q02931 896 aaKnown RBP2.28□□□□□ -2.04
PFD1YJL179W TAF8Q03750 510 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms