RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W CBP3P21560 335 aa5.72□□□□□ -1.49
UBC6YER100W ADP1P25371 1049 aa5.72□□□□□ -1.49
UBC6YER100W STE14P32584 239 aa5.72□□□□□ -1.49
UBC6YER100W SLC1P33333 303 aa5.72□□□□□ -1.49
UBC6YER100W SAK1P38990 1142 aa5.72□□□□□ -1.49
UBC6YER100W PUG1P40100 303 aa5.72□□□□□ -1.49
UBC6YER100W PFA3P42836 336 aa5.72□□□□□ -1.49
UBC6YER100W YFL066CP43538 392 aa5.72□□□□□ -1.49
UBC6YER100W YBP2P53169 641 aa5.72□□□□□ -1.49
UBC6YER100W ARG5,6Q01217 863 aa5.72□□□□□ -1.49
UBC6YER100W SSY1Q03770 852 aa5.72□□□□□ -1.49
UBC6YER100W HMO1Q03973 246 aaKnown RBP5.72□□□□□ -1.49
UBC6YER100W PPN1Q04119 674 aa5.72□□□□□ -1.49
UBC6YER100W MCM21Q06675 368 aa5.72□□□□□ -1.49
UBC6YER100W BRE4Q07660 1125 aa5.72□□□□□ -1.49
UBC6YER100W UPC2Q12151 913 aa5.72□□□□□ -1.49
UBC6YER100W LEU2P04173 364 aaPredicted RBP5.71□□□□□ -1.5
UBC6YER100W MIS1P09440 975 aaKnown RBP5.71□□□□□ -1.5
UBC6YER100W FRS1P15624 595 aaKnown RBP5.71□□□□□ -1.5
UBC6YER100W CWH43P25618 953 aa5.71□□□□□ -1.5
UBC6YER100W SIC1P38634 284 aa5.71□□□□□ -1.5
UBC6YER100W CCT3P39077 534 aaKnown RBP5.71□□□□□ -1.5
UBC6YER100W PRY1P47032 299 aa5.71□□□□□ -1.5
UBC6YER100W CTF18P49956 741 aa5.71□□□□□ -1.5
UBC6YER100W TAF4P50105 388 aa5.71□□□□□ -1.5
UBC6YER100W FOL2P51601 243 aaKnown RBP5.71□□□□□ -1.5
UBC6YER100W YNR071CP53757 342 aa5.71□□□□□ -1.5
UBC6YER100W REC102Q02721 264 aa5.71□□□□□ -1.5
UBC6YER100W ASM4Q05166 528 aa5.71□□□□□ -1.5
UBC6YER100W IWR1Q07532 353 aaPredicted RBP5.71□□□□□ -1.5
UBC6YER100W ISA1Q07821 250 aaPredicted RBP5.71□□□□□ -1.5
UBC6YER100W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
UBC6YER100W DBP10Q12389 995 aaKnown RBP5.71□□□□□ -1.5
UBC6YER100W SNF1P06782 633 aaKnown RBP5.7□□□□□ -1.5
UBC6YER100W NUC1P08466 329 aa5.7□□□□□ -1.5
UBC6YER100W MRP7P12687 371 aa5.7□□□□□ -1.5
UBC6YER100W YBR259WP38338 688 aa5.7□□□□□ -1.5
UBC6YER100W FAF1P40546 346 aaPredicted RBP5.7□□□□□ -1.5
UBC6YER100W MET12P46151 657 aa5.7□□□□□ -1.5
UBC6YER100W UPF3P48412 387 aaKnown RBP5.7□□□□□ -1.5
UBC6YER100W PRP31P49704 494 aaPredicted RBP5.7□□□□□ -1.5
UBC6YER100W GSF2Q04697 403 aaKnown RBP5.7□□□□□ -1.5
UBC6YER100W VID22Q05934 901 aa5.7□□□□□ -1.5
UBC6YER100W TDA6Q06466 467 aa5.7□□□□□ -1.5
UBC6YER100W CRD1Q07560 283 aa5.7□□□□□ -1.5
UBC6YER100W MCH5Q08777 521 aa5.7□□□□□ -1.5
UBC6YER100W YDR215CQ12240 137 aa5.7□□□□□ -1.5
UBC6YER100W LPX1Q12405 387 aaKnown RBP5.7□□□□□ -1.5
UBC6YER100W YLR415CO13578 112 aa5.69□□□□□ -1.5
UBC6YER100W SEM1O94742 89 aa5.69□□□□□ -1.5
UBC6YER100W BIK1P11709 440 aa5.69□□□□□ -1.5
UBC6YER100W CHS2P14180 963 aa5.69□□□□□ -1.5
UBC6YER100W ADE2P21264 571 aaKnown RBP5.69□□□□□ -1.5
UBC6YER100W SED4P25365 1065 aa5.69□□□□□ -1.5
UBC6YER100W CBF2P32504 956 aa5.69□□□□□ -1.5
UBC6YER100W PAH1P32567 862 aa5.69□□□□□ -1.5
UBC6YER100W FRD1P32614 470 aaKnown RBP5.69□□□□□ -1.5
UBC6YER100W RIC1P40395 1056 aa5.69□□□□□ -1.5
UBC6YER100W BUD8P41698 603 aa5.69□□□□□ -1.5
UBC6YER100W PXA1P41909 870 aa5.69□□□□□ -1.5
UBC6YER100W SAP4P53036 818 aa5.69□□□□□ -1.5
UBC6YER100W IMA1P53051 589 aa5.69□□□□□ -1.5
UBC6YER100W RCR2Q03446 210 aaKnown RBP5.69□□□□□ -1.5
UBC6YER100W CSR1Q06705 408 aaKnown RBP5.69□□□□□ -1.5
UBC6YER100W AAD4Q07747 329 aa5.69□□□□□ -1.5
UBC6YER100W TPO1Q07824 586 aa5.69□□□□□ -1.5
UBC6YER100W GAL10P04397 699 aa5.68□□□□□ -1.5
UBC6YER100W TUB3P09734 445 aaKnown RBP5.68□□□□□ -1.5
UBC6YER100W CLB4P24871 460 aa5.68□□□□□ -1.5
UBC6YER100W COQ2P32378 372 aa5.68□□□□□ -1.5
UBC6YER100W MTC7P32633 139 aa5.68□□□□□ -1.5
UBC6YER100W MRPL36P36531 177 aa5.68□□□□□ -1.5
UBC6YER100W APT2P36973 181 aa5.68□□□□□ -1.5
UBC6YER100W YER010CP40011 234 aa5.68□□□□□ -1.5
UBC6YER100W SGM1P47166 707 aa5.68□□□□□ -1.5
UBC6YER100W WHI4Q07655 649 aaKnown RBP5.68□□□□□ -1.5
UBC6YER100W CYC1P00044 109 aaPredicted RBP5.67□□□□□ -1.5
UBC6YER100W TUF1P02992 437 aaKnown RBP5.67□□□□□ -1.5
UBC6YER100W POL3P15436 1097 aa5.67□□□□□ -1.5
UBC6YER100W SAN1P22470 610 aa5.67□□□□□ -1.5
UBC6YER100W PRP22P24384 1145 aaKnown RBP5.67□□□□□ -1.5
UBC6YER100W RKM3P38222 552 aa5.67□□□□□ -1.5
UBC6YER100W AXL2P38928 823 aa5.67□□□□□ -1.5
UBC6YER100W PSF2P40359 213 aa5.67□□□□□ -1.5
UBC6YER100W DPH1P40487 425 aaKnown RBP5.67□□□□□ -1.5
UBC6YER100W VHR1P40522 640 aa5.67□□□□□ -1.5
UBC6YER100W CHA4P43634 648 aa5.67□□□□□ -1.5
UBC6YER100W YLR122CQ12312 125 aa5.67□□□□□ -1.5
UBC6YER100W SWM1Q12379 170 aa5.67□□□□□ -1.5
UBC6YER100W HIS5P07172 385 aa5.66□□□□□ -1.5
UBC6YER100W ERG20P08524 352 aaKnown RBP5.66□□□□□ -1.5
UBC6YER100W PRP4P20053 465 aaKnown RBP5.66□□□□□ -1.5
UBC6YER100W PRP45P28004 379 aaPredicted RBP5.66□□□□□ -1.5
UBC6YER100W PRE4P30657 266 aa5.66□□□□□ -1.5
UBC6YER100W BLI1P35727 113 aa5.66□□□□□ -1.5
UBC6YER100W MUD2P36084 527 aaKnown RBP5.66□□□□□ -1.5
UBC6YER100W YBR138CP38277 524 aa5.66□□□□□ -1.5
UBC6YER100W YHR033WP38690 423 aa5.66□□□□□ -1.5
UBC6YER100W BCD1P38772 366 aa5.66□□□□□ -1.5
UBC6YER100W PRM2P40534 656 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms