RNA–Protein interactions for RNA: ENST00000642122.1

ALK-207, Transcript of ALK receptor tyrosine kinase, humanhuman

BASIC

Gene ALK, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-207ENST00000642122 ERVV-1B6SEH8 477 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 HMGB1P09429 215 aaKnown RBP13.51□□□□□ -0.25
ALK-207ENST00000642122 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
ALK-207ENST00000642122 SMARCC2Q8TAQ2 1214 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
ALK-207ENST00000642122 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 ATRNO75882 1429 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 MYO5AQ9Y4I1 1855 aaKnown RBP13.51□□□□□ -0.25
ALK-207ENST00000642122 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
ALK-207ENST00000642122 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
ALK-207ENST00000642122 EP400Q96L91 3159 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 FUCA2Q9BTY2 467 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 AKAP11Q9UKA4 1901 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 SPEF2Q9C093 1822 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 WTIPA6NIX2 430 aaPredicted RBP13.5□□□□□ -0.25
ALK-207ENST00000642122 CAMTA2O94983 1202 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 ADD2P35612 726 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 ANTXR2P58335 489 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
ALK-207ENST00000642122 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 ZSCAN30Q86W11 494 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
ALK-207ENST00000642122 MYH3P11055 1940 aa13.5□□□□□ -0.25
ALK-207ENST00000642122 ZNF532Q9HCE3 1301 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 ZFYP08048 801 aaPredicted RBP13.49□□□□□ -0.25
ALK-207ENST00000642122 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 CKAP2LQ8IYA6 745 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 GJB4Q9NTQ9 266 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 COL4A1P02462 1669 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 PRC1O43663 620 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
ALK-207ENST00000642122 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
ALK-207ENST00000642122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.48□□□□□ -0.25
ALK-207ENST00000642122 FDPSP14324 419 aaKnown RBP13.48□□□□□ -0.25
ALK-207ENST00000642122 TBC1D10CQ8IV04 446 aa13.48□□□□□ -0.25
ALK-207ENST00000642122 MYH14Q7Z406 1995 aaKnown RBP13.48□□□□□ -0.25
ALK-207ENST00000642122 NR1I2O75469 434 aa13.48□□□□□ -0.25
ALK-207ENST00000642122 APPP05067 770 aa13.48□□□□□ -0.25
ALK-207ENST00000642122 FGFR2P21802 821 aa13.48□□□□□ -0.25
ALK-207ENST00000642122 RASGRF1Q13972 1273 aa13.48□□□□□ -0.25
ALK-207ENST00000642122 PUM3Q15397 648 aaKnown RBP13.48□□□□□ -0.25
ALK-207ENST00000642122 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
ALK-207ENST00000642122 UTP14AQ9BVJ6 771 aaKnown RBP13.48□□□□□ -0.25
ALK-207ENST00000642122 IQSEC3Q9UPP2 1182 aaPredicted RBP13.48□□□□□ -0.25
ALK-207ENST00000642122 ELP1O95163 1332 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 SALL1Q9NSC2 1324 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 ZNF213O14771 459 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 AP5Z1O43299 807 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 PDE6AP16499 860 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 RXRAP19793 462 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 ADD1P35611 737 aaKnown RBP13.47□□□□□ -0.25
ALK-207ENST00000642122 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 MPHOSPH8Q99549 860 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 BCAMP50895 628 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
ALK-207ENST00000642122 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 LPIN2Q92539 896 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 NAP1L5Q96NT1 182 aaPredicted RBP13.47□□□□□ -0.25
ALK-207ENST00000642122 LLPHQ9BRT6 129 aaKnown RBP13.47□□□□□ -0.25
ALK-207ENST00000642122 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.47□□□□□ -0.25
ALK-207ENST00000642122 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
ALK-207ENST00000642122 SENP2Q9HC62 589 aa13.47□□□□□ -0.25
ALK-207ENST00000642122 GOLGA6L4A6NEF3 574 aa13.46□□□□□ -0.25
ALK-207ENST00000642122 ONECUT3O60422 494 aaPredicted RBP13.46□□□□□ -0.25
ALK-207ENST00000642122 KDM4AO75164 1064 aa13.46□□□□□ -0.25
ALK-207ENST00000642122 MSNP26038 577 aaKnown RBP13.46□□□□□ -0.25
ALK-207ENST00000642122 ARID4AP29374 1257 aaPredicted RBP13.46□□□□□ -0.25
ALK-207ENST00000642122 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
ALK-207ENST00000642122 BICD2Q8TD16 824 aa13.46□□□□□ -0.25
ALK-207ENST00000642122 HPS5Q9UPZ3 1129 aa13.46□□□□□ -0.25
ALK-207ENST00000642122 SBF2Q86WG5 1849 aa13.46□□□□□ -0.25
ALK-207ENST00000642122 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 GOLGA8BA8MQT2 603 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 NTSR2O95665 410 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 CYB5R4Q7L1T6 521 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 STK11IPQ8N1F8 1099 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 SPATA5Q8NB90 893 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.26
ALK-207ENST00000642122 ZNF830Q96NB3 372 aaPredicted RBP13.46□□□□□ -0.26
ALK-207ENST00000642122 NUP62CLQ9H1M0 184 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.26
ALK-207ENST00000642122 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 ABCC12Q96J65 1359 aa13.46□□□□□ -0.26
ALK-207ENST00000642122 MCM5P33992 734 aa13.45□□□□□ -0.26
ALK-207ENST00000642122 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
ALK-207ENST00000642122 RALYLQ86SE5 291 aaKnown RBP13.45□□□□□ -0.26
ALK-207ENST00000642122 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
ALK-207ENST00000642122 MAGEB6Q8N7X4 407 aa13.45□□□□□ -0.26
ALK-207ENST00000642122 NCOA7Q8NI08 942 aa13.45□□□□□ -0.26
ALK-207ENST00000642122 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms