RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 VPS37DQ86XT2 251 aa19.59■□□□□ 0.73
PHGDH-216ENST00000641375 GRAPLQ8TC17 118 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-216ENST00000641375 TNPO1Q92973 898 aaKnown RBP19.59■□□□□ 0.73
PHGDH-216ENST00000641375 AKT1S1Q96B36 256 aa19.59■□□□□ 0.73
PHGDH-216ENST00000641375 SH2B1Q9NRF2 756 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-216ENST00000641375 GPAA1O43292 621 aa19.58■□□□□ 0.72
PHGDH-216ENST00000641375 GBP4Q96PP9 640 aa19.58■□□□□ 0.72
PHGDH-216ENST00000641375 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-216ENST00000641375 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
PHGDH-216ENST00000641375 RPGRQ92834 1020 aaKnown RBP19.57■□□□□ 0.72
PHGDH-216ENST00000641375 TAF6LQ9Y6J9 622 aa19.57■□□□□ 0.72
PHGDH-216ENST00000641375 GYG1P46976 350 aa19.57■□□□□ 0.72
PHGDH-216ENST00000641375 ZNF827Q17R98 1081 aa19.57■□□□□ 0.72
PHGDH-216ENST00000641375 CRY2Q49AN0 593 aa19.57■□□□□ 0.72
PHGDH-216ENST00000641375 TCRBV5S4A2TA0A5A2 114 aa19.56■□□□□ 0.72
PHGDH-216ENST00000641375 SEMA3EO15041 775 aa19.56■□□□□ 0.72
PHGDH-216ENST00000641375 MCM4P33991 863 aa19.56■□□□□ 0.72
PHGDH-216ENST00000641375 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
PHGDH-216ENST00000641375 RTN4Q9NQC3 1192 aaKnown RBP19.56■□□□□ 0.72
PHGDH-216ENST00000641375 RGS17Q9UGC6 210 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-216ENST00000641375 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-216ENST00000641375 POLRMTO00411 1230 aaKnown RBP19.56■□□□□ 0.72
PHGDH-216ENST00000641375 FAM84BQ96KN1 310 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-216ENST00000641375 WWC3Q9ULE0 1092 aa19.56■□□□□ 0.72
PHGDH-216ENST00000641375 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
PHGDH-216ENST00000641375 MYH13Q9UKX3 1938 aa19.55■□□□□ 0.72
PHGDH-216ENST00000641375 LAMA4Q16363 1823 aa19.55■□□□□ 0.72
PHGDH-216ENST00000641375 IMMTQ16891 758 aaKnown RBP19.55■□□□□ 0.72
PHGDH-216ENST00000641375 DDR1Q08345 913 aa19.54■□□□□ 0.72
PHGDH-216ENST00000641375 FBXO33Q7Z6M2 555 aa19.54■□□□□ 0.72
PHGDH-216ENST00000641375 MAGEB6Q8N7X4 407 aa19.54■□□□□ 0.72
PHGDH-216ENST00000641375 AIDAQ96BJ3 306 aa19.54■□□□□ 0.72
PHGDH-216ENST00000641375 LRP2BPQ9P2M1 347 aa19.54■□□□□ 0.72
PHGDH-216ENST00000641375 DDX11L8A8MPP1 907 aa19.54■□□□□ 0.72
PHGDH-216ENST00000641375 CLEC17AQ6ZS10 378 aa19.54■□□□□ 0.72
PHGDH-216ENST00000641375 RBM17Q96I25 401 aaKnown RBP19.54■□□□□ 0.72
PHGDH-216ENST00000641375 PDS5AQ29RF7 1337 aaKnown RBP19.53■□□□□ 0.72
PHGDH-216ENST00000641375 FOXP2O15409 715 aa19.53■□□□□ 0.72
PHGDH-216ENST00000641375 FGAP02671 866 aa19.53■□□□□ 0.72
PHGDH-216ENST00000641375 COL23A1Q86Y22 540 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-216ENST00000641375 ZBTB22O15209 634 aa19.53■□□□□ 0.72
PHGDH-216ENST00000641375 POTEAQ6S8J7 498 aa19.53■□□□□ 0.72
PHGDH-216ENST00000641375 LEMD3Q9Y2U8 911 aa19.53■□□□□ 0.72
PHGDH-216ENST00000641375 WTIPA6NIX2 430 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-216ENST00000641375 E7EWF7 191 aa19.52■□□□□ 0.72
PHGDH-216ENST00000641375 HIBADHP31937 336 aaKnown RBP19.52■□□□□ 0.72
PHGDH-216ENST00000641375 LARP6Q9BRS8 491 aaKnown RBP19.52■□□□□ 0.72
PHGDH-216ENST00000641375 ANKIB1Q9P2G1 1089 aa19.52■□□□□ 0.72
PHGDH-216ENST00000641375 IQSEC3Q9UPP2 1182 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-216ENST00000641375 XDHP47989 1333 aa19.52■□□□□ 0.71
PHGDH-216ENST00000641375 KLRG2A4D1S0 409 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-216ENST00000641375 STOX1Q6ZVD7 989 aa19.51■□□□□ 0.71
PHGDH-216ENST00000641375 DHX32Q7L7V1 743 aaKnown RBP19.51■□□□□ 0.71
PHGDH-216ENST00000641375 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
PHGDH-216ENST00000641375 NRXN2Q9P2S2 1712 aa19.51■□□□□ 0.71
PHGDH-216ENST00000641375 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-216ENST00000641375 TOB2Q14106 344 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-216ENST00000641375 ME3Q16798 604 aa19.51■□□□□ 0.71
PHGDH-216ENST00000641375 STRBPQ96SI9 672 aaKnown RBP19.51■□□□□ 0.71
PHGDH-216ENST00000641375 TPCN1Q9ULQ1 816 aa19.51■□□□□ 0.71
PHGDH-216ENST00000641375 ZNF213O14771 459 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 BBOX1O75936 387 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 PTMSP20962 102 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 TTLL5Q6EMB2 1281 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 ZMYM6O95789 1325 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 COL1A1P02452 1464 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-216ENST00000641375 LARGE1O95461 756 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 GNAT2P19087 354 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 PKP1Q13835 747 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 COL9A3Q14050 684 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-216ENST00000641375 TCEANC2Q96MN5 208 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 CRAMP1Q96RY5 1269 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 ABCF2Q9UG63 623 aa19.5■□□□□ 0.71
PHGDH-216ENST00000641375 GOLGA6L22H0YM25 854 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 APPP05067 770 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 Q6ZUG5 572 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 KLRK1P26718 216 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 FGD1P98174 961 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 ALX1Q15699 326 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 TMC4Q7Z404 712 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 CCDC83Q8IWF9 413 aa19.49■□□□□ 0.71
PHGDH-216ENST00000641375 PNPLA7Q6ZV29 1317 aa19.48■□□□□ 0.71
PHGDH-216ENST00000641375 PATL2C9JE40 543 aaKnown RBP19.48■□□□□ 0.71
PHGDH-216ENST00000641375 MBD4O95243 580 aa19.48■□□□□ 0.71
PHGDH-216ENST00000641375 EXOSC10Q01780 885 aaKnown RBP19.48■□□□□ 0.71
PHGDH-216ENST00000641375 TMED8Q6PL24 325 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-216ENST00000641375 BRIP1Q9BX63 1249 aa19.48■□□□□ 0.71
PHGDH-216ENST00000641375 RAI14Q9P0K7 980 aa19.48■□□□□ 0.71
PHGDH-216ENST00000641375 IRS2Q9Y4H2 1338 aa19.48■□□□□ 0.71
PHGDH-216ENST00000641375 BRD1O95696 1058 aa19.47■□□□□ 0.71
PHGDH-216ENST00000641375 ANKRD31Q8N7Z5 1873 aa19.47■□□□□ 0.71
PHGDH-216ENST00000641375 A0A0G2JLW4 131 aa19.47■□□□□ 0.71
PHGDH-216ENST00000641375 C15orf52Q6ZUT6 534 aaKnown RBP19.47■□□□□ 0.71
PHGDH-216ENST00000641375 ZDHHC9Q9Y397 364 aa19.47■□□□□ 0.71
PHGDH-216ENST00000641375 CACNA1SQ13698 1873 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 IGSF3O75054 1194 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 BAG4O95429 457 aaKnown RBP19.46■□□□□ 0.71
PHGDH-216ENST00000641375 CYP7A1P22680 504 aa19.46■□□□□ 0.71
PHGDH-216ENST00000641375 HAND2P61296 217 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms