RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 SWI5Q1ZZU3 235 aa7.04□□□□□ -1.28
RTTN-220ENST00000640654 SLC7A3Q8WY07 619 aa7.04□□□□□ -1.28
RTTN-220ENST00000640654 CLUAP1Q96AJ1 413 aa7.04□□□□□ -1.28
RTTN-220ENST00000640654 PRIMPOLQ96LW4 560 aa7.04□□□□□ -1.28
RTTN-220ENST00000640654 CCDC39Q9UFE4 941 aa7.04□□□□□ -1.28
RTTN-220ENST00000640654 JUNBP17275 347 aaPredicted RBP7.03□□□□□ -1.28
RTTN-220ENST00000640654 FNBP4Q8N3X1 1017 aaPredicted RBP7.03□□□□□ -1.28
RTTN-220ENST00000640654 POU5F2Q8N7G0 328 aa7.03□□□□□ -1.28
RTTN-220ENST00000640654 CEP120Q8N960 986 aa7.03□□□□□ -1.28
RTTN-220ENST00000640654 COL26A1Q96A83 441 aa7.03□□□□□ -1.28
RTTN-220ENST00000640654 SAP130Q9H0E3 1048 aa7.03□□□□□ -1.28
RTTN-220ENST00000640654 PRMT3O60678 531 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 PRNPP04156 253 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 C8AP07357 584 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 MSMPQ1L6U9 139 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 NUTM2GQ5VZR2 741 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 PAOXQ6QHF9 649 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 GPR152Q8TDT2 470 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 POP1Q99575 1024 aaKnown RBP7.02□□□□□ -1.29
RTTN-220ENST00000640654 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 CYP4F12Q9HCS2 524 aa7.02□□□□□ -1.29
RTTN-220ENST00000640654 NOVA2Q9UNW9 492 aaKnown RBP7.02□□□□□ -1.29
RTTN-220ENST00000640654 CLIP1P30622 1438 aa7.01□□□□□ -1.29
RTTN-220ENST00000640654 MEGF11A6BM72 1044 aa7.01□□□□□ -1.29
RTTN-220ENST00000640654 F13BP05160 661 aa7.01□□□□□ -1.29
RTTN-220ENST00000640654 PDE12Q6L8Q7 609 aaKnown RBP7.01□□□□□ -1.29
RTTN-220ENST00000640654 ADAMTSL4Q6UY14 1074 aa7.01□□□□□ -1.29
RTTN-220ENST00000640654 ABTB2Q8N961 1025 aa7.01□□□□□ -1.29
RTTN-220ENST00000640654 C12orf50Q8NA57 414 aaPredicted RBP7.01□□□□□ -1.29
RTTN-220ENST00000640654 AGBL5Q8NDL9 886 aa7.01□□□□□ -1.29
RTTN-220ENST00000640654 ACIN1Q9UKV3 1341 aaKnown RBP7.01□□□□□ -1.29
RTTN-220ENST00000640654 CYP26A1O43174 497 aa7□□□□□ -1.29
RTTN-220ENST00000640654 CYP2E1P05181 493 aaPredicted RBP7□□□□□ -1.29
RTTN-220ENST00000640654 C19orf57Q0VDD7 668 aa7□□□□□ -1.29
RTTN-220ENST00000640654 NFKBIBQ15653 356 aa7□□□□□ -1.29
RTTN-220ENST00000640654 CBLL1Q75N03 491 aa7□□□□□ -1.29
RTTN-220ENST00000640654 YIPF2Q9BWQ6 316 aa7□□□□□ -1.29
RTTN-220ENST00000640654 BSDC1Q9NW68 430 aaPredicted RBP7□□□□□ -1.29
RTTN-220ENST00000640654 TOP2BQ02880 1626 aa7□□□□□ -1.29
RTTN-220ENST00000640654 RAPGEF2Q9Y4G8 1499 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 BIVM-ERCC5R4GMW8 1640 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 FAM95CA0A1B0GW59 222 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 TNFRSF10BO14763 440 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 USP11P51784 963 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 ZNF438Q7Z4V0 828 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 FLCNQ8NFG4 579 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 MKNK1Q9BUB5 465 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 KANSL3Q9P2N6 904 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 VPS8Q8N3P4 1428 aa6.99□□□□□ -1.29
RTTN-220ENST00000640654 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
RTTN-220ENST00000640654 RPLP1P05386 114 aaKnown RBP6.98□□□□□ -1.29
RTTN-220ENST00000640654 ITGB5P18084 799 aa6.98□□□□□ -1.29
RTTN-220ENST00000640654 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
RTTN-220ENST00000640654 STIM2Q9P246 746 aa6.98□□□□□ -1.29
RTTN-220ENST00000640654 NAA30Q147X3 362 aaPredicted RBP6.97□□□□□ -1.29
RTTN-220ENST00000640654 CDCA8Q53HL2 280 aa6.97□□□□□ -1.29
RTTN-220ENST00000640654 FAM26DQ5JW98 314 aa6.97□□□□□ -1.29
RTTN-220ENST00000640654 DIEXFQ68CQ4 756 aaKnown RBP6.97□□□□□ -1.29
RTTN-220ENST00000640654 SMG8Q8ND04 991 aaKnown RBP6.97□□□□□ -1.29
RTTN-220ENST00000640654 TBC1D32Q96NH3 1257 aa6.97□□□□□ -1.29
RTTN-220ENST00000640654 CES1P23141 567 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 OCLNQ16625 522 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 CFAP70Q5T0N1 1121 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 TTC16Q8NEE8 873 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 SUGCTQ9HAC7 445 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 TMEM63CQ9P1W3 806 aa6.96□□□□□ -1.3
RTTN-220ENST00000640654 PCSK2P16519 638 aa6.95□□□□□ -1.3
RTTN-220ENST00000640654 IKBKEQ14164 716 aa6.95□□□□□ -1.3
RTTN-220ENST00000640654 NUDT16Q96DE0 195 aaKnown RBP6.95□□□□□ -1.3
RTTN-220ENST00000640654 DZANK1Q9NVP4 752 aa6.95□□□□□ -1.3
RTTN-220ENST00000640654 SALL4Q9UJQ4 1053 aa6.95□□□□□ -1.3
RTTN-220ENST00000640654 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
RTTN-220ENST00000640654 HMGXB3Q12766 1538 aa6.95□□□□□ -1.3
RTTN-220ENST00000640654 NCAPD3P42695 1498 aa6.94□□□□□ -1.3
RTTN-220ENST00000640654 BIN1O00499 593 aa6.94□□□□□ -1.3
RTTN-220ENST00000640654 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
RTTN-220ENST00000640654 TIAF1O95411 115 aa6.94□□□□□ -1.3
RTTN-220ENST00000640654 DUSP27Q5VZP5 1158 aa6.94□□□□□ -1.3
RTTN-220ENST00000640654 ZAR1Q86SH2 424 aa6.94□□□□□ -1.3
RTTN-220ENST00000640654 FBLIM1Q8WUP2 373 aa6.94□□□□□ -1.3
RTTN-220ENST00000640654 PMEPA1Q969W9 287 aa6.94□□□□□ -1.3
RTTN-220ENST00000640654 CXXC1Q9P0U4 656 aaPredicted RBP6.94□□□□□ -1.3
RTTN-220ENST00000640654 PRXQ9BXM0 1461 aa6.93□□□□□ -1.3
RTTN-220ENST00000640654 CUX1P39880 1505 aa6.93□□□□□ -1.3
RTTN-220ENST00000640654 ERICH3Q5RHP9 1530 aa6.93□□□□□ -1.3
RTTN-220ENST00000640654 RANGAP1P46060 587 aaPredicted RBP6.93□□□□□ -1.3
RTTN-220ENST00000640654 CYP27A1Q02318 531 aa6.93□□□□□ -1.3
RTTN-220ENST00000640654 TMEM102Q8N9M5 508 aaPredicted RBP6.93□□□□□ -1.3
RTTN-220ENST00000640654 BSNDQ8WZ55 320 aa6.93□□□□□ -1.3
RTTN-220ENST00000640654 LOC100289279A0A1B0GTE1 492 aa6.92□□□□□ -1.3
RTTN-220ENST00000640654 NFKBIEO00221 500 aa6.92□□□□□ -1.3
RTTN-220ENST00000640654 ACPPP15309 386 aa6.92□□□□□ -1.3
RTTN-220ENST00000640654 ELOAQ14241 798 aaKnown RBP6.92□□□□□ -1.3
RTTN-220ENST00000640654 EXOSC6Q5RKV6 272 aaKnown RBP6.92□□□□□ -1.3
RTTN-220ENST00000640654 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
RTTN-220ENST00000640654 PRKAG2Q9UGJ0 569 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms