RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 IFI16Q16666 785 aaKnown RBP9.35□□□□□ -0.91
NECAP1-227ENST00000640648 RNF10Q8N5U6 811 aaKnown RBP9.35□□□□□ -0.91
NECAP1-227ENST00000640648 PHACTR3Q96KR7 559 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 KIF2CQ99661 725 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 ARHGAP6O43182 974 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 HIP1RO75146 1068 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 KRT83P78385 493 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 USP48Q86UV5 1035 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 TEX9Q8N6V9 391 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 ATP10BO94823 1461 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 PI4KAP2A4QPH2 592 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 VAMP4O75379 141 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 ATP2B3Q16720 1220 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 SAMD1Q6SPF0 538 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-227ENST00000640648 PI4KAP1Q8N8J0 262 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 IQCDQ96DY2 449 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 PIK3C2GO75747 1445 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 BIN1O00499 593 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-227ENST00000640648 ATP5DP30049 168 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 TRIM22Q8IYM9 498 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-227ENST00000640648 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 ECHDC1Q9NTX5 307 aa9.34□□□□□ -0.91
NECAP1-227ENST00000640648 ALDH3A1P30838 453 aa9.34□□□□□ -0.92
NECAP1-227ENST00000640648 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.92
NECAP1-227ENST00000640648 BRAPQ7Z569 592 aa9.34□□□□□ -0.92
NECAP1-227ENST00000640648 IDH1O75874 414 aaKnown RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 ICA1Q05084 483 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 PLCB4Q15147 1175 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 ISM2Q6H9L7 571 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 TRIM58Q8NG06 486 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 OTUD7AQ8TE49 926 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 NOL3O60936 208 aaKnown RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 ETF1P62495 437 aaKnown RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 SFSWAPQ12872 951 aaKnown RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 TRIM14Q14142 442 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 MYD88Q99836 296 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 CAPS2Q9BXY5 557 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 CEP131Q9UPN4 1083 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 COL17A1Q9UMD9 1497 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 SLFN14P0C7P3 912 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 TROVE2P10155 538 aaKnown RBP eCLIP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 NCBP1Q09161 790 aaKnown RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 JARID2Q92833 1246 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 ANO6Q4KMQ2 910 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 PHLDB3Q6NSJ2 640 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 PROSER2Q86WR7 435 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 PDCD7Q8N8D1 485 aaKnown RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 TSGA10Q9BZW7 698 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 POLKQ9UBT6 870 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 ZNF215Q9UL58 517 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-227ENST00000640648 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
NECAP1-227ENST00000640648 PNMA6AP0CW24 399 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 MTMR3Q13615 1198 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 SLC30A9Q6PML9 568 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 KIF6Q6ZMV9 814 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 RASEFQ8IZ41 740 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 FSIP1Q8NA03 581 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 ETAA1Q9NY74 926 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 NUP160Q12769 1436 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 SGSM2O43147 1006 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 EVI5O60447 810 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 CYLC1P35663 651 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 SLC8A3P57103 927 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 ZSCAN25Q6NSZ9 544 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 RAB11FIP4Q86YS3 637 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 RNF216Q9NWF9 866 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 SYCP2Q9BX26 1530 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 GOLGA6BA6NDN3 693 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 PTCD1O75127 700 aaKnown RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 SYT1P21579 422 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 CUL3Q13618 768 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 LRRC45Q96CN5 670 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 JPH2Q9BR39 696 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 DCTPP1Q9H773 170 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 CTTNBP2NLQ9P2B4 639 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 MYO1AQ9UBC5 1043 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 CETN3O15182 167 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 DTNBO60941 627 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 SNUPNO95149 360 aaKnown RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 KIF4AO95239 1232 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 DNM1Q05193 864 aaKnown RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 CCDC110Q8TBZ0 833 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 LRRC2Q9BYS8 371 aa9.32□□□□□ -0.92
NECAP1-227ENST00000640648 TPX2Q9ULW0 747 aaKnown RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 U3KPZ7 1027 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-227ENST00000640648 STAMBPO95630 424 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CLUL1Q15846 466 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 THEMISQ8N1K5 641 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-227ENST00000640648 RUBCNQ92622 972 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CORO7P57737 925 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CEP85Q6P2H3 762 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms