RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 WDR17Q8IZU2 1322 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 GOLGA8BA8MQT2 603 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 FILIP1Q7Z7B0 1213 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 DHX40Q8IX18 779 aaKnown RBP16.3■□□□□ 0.2
SPIN3-239ENST00000640463 STRCP1A6NGW2 1772 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 CTAGE5O15320 804 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 SDF4Q9BRK5 362 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 NWD2Q9ULI1 1742 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 TNNT1P13805 278 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 GPTP24298 496 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 NDUFA8P51970 172 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 SF3A1Q15459 793 aaKnown RBP16.29■□□□□ 0.2
SPIN3-239ENST00000640463 AOPEPQ8N6M6 819 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 C8orf76Q96K31 380 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 ANTXR2P58335 489 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 STK38Q15208 465 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 TPD52L1Q16890 204 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-239ENST00000640463 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-239ENST00000640463 ORC3Q9UBD5 711 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-239ENST00000640463 HPS5Q9UPZ3 1129 aa16.29■□□□□ 0.2
SPIN3-239ENST00000640463 ABCC6O95255 1503 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
SPIN3-239ENST00000640463 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 CPDO75976 1380 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 GPAA1O43292 621 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 CAVIN2O95810 425 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 RXRAP19793 462 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 MB21D2Q8IYB1 491 aaPredicted RBP16.28■□□□□ 0.2
SPIN3-239ENST00000640463 FMR1NBQ8N0W7 255 aaPredicted RBP16.28■□□□□ 0.2
SPIN3-239ENST00000640463 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 CTNNA3Q9UI47 895 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 USP27XA6NNY8 438 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 PPP4R3BQ5MIZ7 849 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 LRRC8AQ8IWT6 810 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 ANO10Q9NW15 660 aa16.28■□□□□ 0.2
SPIN3-239ENST00000640463 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 BIN1O00499 593 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 CPLX1O14810 134 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 IL2RBP14784 551 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
SPIN3-239ENST00000640463 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 AIFM3Q96NN9 605 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 AKAP2Q9Y2D5 859 aa16.27■□□□□ 0.2
SPIN3-239ENST00000640463 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.19
SPIN3-239ENST00000640463 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.19
SPIN3-239ENST00000640463 ZNF213O14771 459 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 NAA30Q147X3 362 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-239ENST00000640463 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 SARM1Q6SZW1 724 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 APPBP2Q92624 585 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 CDC25BP30305 580 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 MCAMP43121 646 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 CBX1P83916 185 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
SPIN3-239ENST00000640463 EVCP57679 992 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 HLFQ16534 295 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 ATP2B3Q16720 1220 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 ISM2Q6H9L7 571 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 BRINP3Q76B58 766 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 CEP57L1Q8IYX8 460 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 FBXO18Q8NFZ0 1043 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 MRFAP1L1Q96HT8 127 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
SPIN3-239ENST00000640463 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-239ENST00000640463 DPCR1Q3MIW9 517 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 GREM2Q9H772 168 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 CCDC69A6NI79 296 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 APPP05067 770 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 LRRFIP1Q32MZ4 808 aaKnown RBP16.25■□□□□ 0.19
SPIN3-239ENST00000640463 MYSM1Q5VVJ2 828 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 LDHAL6AQ6ZMR3 332 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 PDCL2Q8N4E4 241 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
SPIN3-239ENST00000640463 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
SPIN3-239ENST00000640463 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 SPTLC2O15270 562 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 SKILP12757 684 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
SPIN3-239ENST00000640463 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
SPIN3-239ENST00000640463 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 NBPF3Q9H094 633 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 CTIFO43310 598 aaKnown RBP16.24■□□□□ 0.19
SPIN3-239ENST00000640463 HSPA2P54652 639 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 SENP2Q9HC62 589 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 INCENPQ9NQS7 918 aa16.24■□□□□ 0.19
SPIN3-239ENST00000640463 IDH1O75874 414 aaKnown RBP16.23■□□□□ 0.19
SPIN3-239ENST00000640463 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms