RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 NEFLP07196 543 aa9.23□□□□□ -0.93
CCDC7-216ENST00000640058 WNT8BQ93098 351 aa9.23□□□□□ -0.93
CCDC7-216ENST00000640058 LIN7BQ9HAP6 207 aa9.23□□□□□ -0.93
CCDC7-216ENST00000640058 NPHS2Q9NP85 383 aa9.23□□□□□ -0.93
CCDC7-216ENST00000640058 GNEQ9Y223 722 aaKnown RBP9.23□□□□□ -0.93
CCDC7-216ENST00000640058 SOX1O00570 391 aaPredicted RBP9.22□□□□□ -0.93
CCDC7-216ENST00000640058 CPNE3O75131 537 aaKnown RBP9.22□□□□□ -0.93
CCDC7-216ENST00000640058 ARL4DP49703 201 aa9.22□□□□□ -0.93
CCDC7-216ENST00000640058 C19orf57Q0VDD7 668 aa9.22□□□□□ -0.93
CCDC7-216ENST00000640058 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
CCDC7-216ENST00000640058 DZIP1LQ8IYY4 767 aaKnown RBP9.22□□□□□ -0.93
CCDC7-216ENST00000640058 OSGEPQ9NPF4 335 aa9.22□□□□□ -0.93
CCDC7-216ENST00000640058 IGHA2P01877 340 aa9.21□□□□□ -0.94
CCDC7-216ENST00000640058 SPRED3Q2MJR0 410 aa9.21□□□□□ -0.94
CCDC7-216ENST00000640058 Q6ZS46 218 aa9.21□□□□□ -0.94
CCDC7-216ENST00000640058 CITED4Q96RK1 184 aa9.21□□□□□ -0.94
CCDC7-216ENST00000640058 UBL7Q96S82 380 aaPredicted RBP9.21□□□□□ -0.94
CCDC7-216ENST00000640058 IVNS1ABPQ9Y6Y0 642 aa9.21□□□□□ -0.94
CCDC7-216ENST00000640058 EIF1AYO14602 144 aaKnown RBP9.2□□□□□ -0.94
CCDC7-216ENST00000640058 GRIA4P48058 902 aa9.2□□□□□ -0.94
CCDC7-216ENST00000640058 ZMYM1Q5SVZ6 1142 aa9.2□□□□□ -0.94
CCDC7-216ENST00000640058 TCF12Q99081 682 aa9.2□□□□□ -0.94
CCDC7-216ENST00000640058 RBCK1Q9BYM8 510 aa9.2□□□□□ -0.94
CCDC7-216ENST00000640058 A0A096LPE4 126 aa9.19□□□□□ -0.94
CCDC7-216ENST00000640058 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
CCDC7-216ENST00000640058 ESRRAP11474 423 aaPredicted RBP9.19□□□□□ -0.94
CCDC7-216ENST00000640058 PRR23CQ6ZRP0 262 aa9.19□□□□□ -0.94
CCDC7-216ENST00000640058 TMC7Q7Z402 723 aa9.19□□□□□ -0.94
CCDC7-216ENST00000640058 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
CCDC7-216ENST00000640058 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
CCDC7-216ENST00000640058 EHD4Q9H223 541 aa9.19□□□□□ -0.94
CCDC7-216ENST00000640058 MAPK1P28482 360 aa9.18□□□□□ -0.94
CCDC7-216ENST00000640058 GSTM4Q03013 218 aa9.18□□□□□ -0.94
CCDC7-216ENST00000640058 CCDC74AQ96AQ1 378 aa9.18□□□□□ -0.94
CCDC7-216ENST00000640058 DMRTB1Q96MA1 342 aa9.18□□□□□ -0.94
CCDC7-216ENST00000640058 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
CCDC7-216ENST00000640058 DCTN4Q9UJW0 460 aa9.18□□□□□ -0.94
CCDC7-216ENST00000640058 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
CCDC7-216ENST00000640058 CEP41Q9BYV8 373 aa9.17□□□□□ -0.94
CCDC7-216ENST00000640058 PCDH1Q08174 1060 aa9.16□□□□□ -0.94
CCDC7-216ENST00000640058 KIAA0319Q5VV43 1072 aa9.16□□□□□ -0.94
CCDC7-216ENST00000640058 ARMC10Q8N2F6 343 aa9.16□□□□□ -0.94
CCDC7-216ENST00000640058 UTP4Q969X6 686 aaKnown RBP9.16□□□□□ -0.94
CCDC7-216ENST00000640058 CSRNP1Q96S65 589 aa9.16□□□□□ -0.94
CCDC7-216ENST00000640058 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
CCDC7-216ENST00000640058 DNAJC25Q9H1X3 360 aa9.16□□□□□ -0.94
CCDC7-216ENST00000640058 SCO2A0A1W2PP80 73 aa9.15□□□□□ -0.94
CCDC7-216ENST00000640058 CLEC4MQ9H2X3 399 aaPredicted RBP9.15□□□□□ -0.94
CCDC7-216ENST00000640058 LOC100289279A0A1B0GTE1 492 aa9.14□□□□□ -0.95
CCDC7-216ENST00000640058 SART1O43290 800 aaKnown RBP9.14□□□□□ -0.95
CCDC7-216ENST00000640058 PREPP48147 710 aa9.14□□□□□ -0.95
CCDC7-216ENST00000640058 KCNA1Q09470 495 aa9.14□□□□□ -0.95
CCDC7-216ENST00000640058 ZNF423Q2M1K9 1284 aa9.14□□□□□ -0.95
CCDC7-216ENST00000640058 PI16Q6UXB8 463 aa9.14□□□□□ -0.95
CCDC7-216ENST00000640058 Q8N3U1 123 aa9.14□□□□□ -0.95
CCDC7-216ENST00000640058 EPS8L3Q8TE67 593 aaKnown RBP9.14□□□□□ -0.95
CCDC7-216ENST00000640058 ALKBH8Q96BT7 664 aaKnown RBP9.14□□□□□ -0.95
CCDC7-216ENST00000640058 FDX2Q6P4F2 183 aa9.13□□□□□ -0.95
CCDC7-216ENST00000640058 FAM46AQ96IP4 442 aaKnown RBP9.13□□□□□ -0.95
CCDC7-216ENST00000640058 SOX17Q9H6I2 414 aaPredicted RBP9.13□□□□□ -0.95
CCDC7-216ENST00000640058 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
CCDC7-216ENST00000640058 DHX15O43143 795 aaKnown RBP9.12□□□□□ -0.95
CCDC7-216ENST00000640058 DLGAP3O95886 979 aa9.12□□□□□ -0.95
CCDC7-216ENST00000640058 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
CCDC7-216ENST00000640058 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
CCDC7-216ENST00000640058 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
CCDC7-216ENST00000640058 PNMA6FA0A0J9YX94 578 aa9.11□□□□□ -0.95
CCDC7-216ENST00000640058 FSTP19883 344 aa9.11□□□□□ -0.95
CCDC7-216ENST00000640058 GRM2Q14416 872 aa9.11□□□□□ -0.95
CCDC7-216ENST00000640058 ANKRD34AQ69YU3 496 aa9.11□□□□□ -0.95
CCDC7-216ENST00000640058 STOML1Q9UBI4 398 aa9.11□□□□□ -0.95
CCDC7-216ENST00000640058 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
CCDC7-216ENST00000640058 NUTM2GQ5VZR2 741 aa9.1□□□□□ -0.95
CCDC7-216ENST00000640058 C12orf50Q8NA57 414 aaPredicted RBP9.1□□□□□ -0.95
CCDC7-216ENST00000640058 MYRFLQ96LU7 910 aa9.1□□□□□ -0.95
CCDC7-216ENST00000640058 KCNF1Q9H3M0 494 aa9.1□□□□□ -0.95
CCDC7-216ENST00000640058 GAS2O43903 313 aaKnown RBP9.09□□□□□ -0.95
CCDC7-216ENST00000640058 CTSBP07858 339 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 BMP3P12645 472 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 ITPKAP23677 461 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 MAOBP27338 520 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 ZNF157P51786 506 aaPredicted RBP9.09□□□□□ -0.95
CCDC7-216ENST00000640058 PLCB3Q01970 1234 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 DSC3Q14574 896 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 TMPRSS13Q9BYE2 586 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
CCDC7-216ENST00000640058 TMEM238LA0A1B0GVL6 79 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 TREHO43280 583 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 DRD2P14416 443 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 MAPK8P45983 427 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 XP32Q5T750 250 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 PRPF40BQ6NWY9 871 aaKnown RBP9.08□□□□□ -0.96
CCDC7-216ENST00000640058 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
CCDC7-216ENST00000640058 GLIS3Q8NEA6 775 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 NRSN2Q9GZP1 204 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 C7orf69Q9H7B7 122 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 TRAK1Q9UPV9 953 aa9.08□□□□□ -0.96
CCDC7-216ENST00000640058 HMX2A2RU54 273 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 MEGF11A6BM72 1044 aa9.07□□□□□ -0.96
CCDC7-216ENST00000640058 ECEL1O95672 775 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms