RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 A0A0A0MRY4 1105 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 SASH3O75995 380 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 MICAL2O94851 1124 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 AFF1P51825 1210 aaKnown RBP8.73□□□□□ -1.01
ATM-229ENST00000639953 C11orf91Q3C1V1 193 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 DMRTC2Q8IXT2 367 aaPredicted RBP8.73□□□□□ -1.01
ATM-229ENST00000639953 IFT43Q96FT9 208 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 EFCC1Q9HA90 598 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 LRFN2Q9ULH4 789 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 SYNMO15061 1565 aa8.73□□□□□ -1.01
ATM-229ENST00000639953 OPLAHO14841 1288 aa8.72□□□□□ -1.01
ATM-229ENST00000639953 SELPP16109 830 aa8.72□□□□□ -1.01
ATM-229ENST00000639953 NKAPLQ5M9Q1 402 aa8.72□□□□□ -1.01
ATM-229ENST00000639953 PRIMPOLQ96LW4 560 aa8.72□□□□□ -1.01
ATM-229ENST00000639953 A2ML1A8K2U0 1454 aa8.71□□□□□ -1.01
ATM-229ENST00000639953 FOXO3O43524 673 aa8.71□□□□□ -1.02
ATM-229ENST00000639953 RGS9O75916 674 aaPredicted RBP8.71□□□□□ -1.02
ATM-229ENST00000639953 PLAURQ03405 335 aa8.71□□□□□ -1.02
ATM-229ENST00000639953 DIEXFQ68CQ4 756 aaKnown RBP8.71□□□□□ -1.02
ATM-229ENST00000639953 SHISA2Q6UWI4 295 aa8.71□□□□□ -1.02
ATM-229ENST00000639953 ILDR2Q71H61 639 aa8.71□□□□□ -1.02
ATM-229ENST00000639953 VTI1AQ96AJ9 217 aa8.71□□□□□ -1.02
ATM-229ENST00000639953 PIK3C2BO00750 1634 aa8.71□□□□□ -1.02
ATM-229ENST00000639953 UGGT1Q9NYU2 1555 aa8.7□□□□□ -1.02
ATM-229ENST00000639953 CPB1P15086 417 aa8.7□□□□□ -1.02
ATM-229ENST00000639953 MLLT1Q03111 559 aaPredicted RBP8.7□□□□□ -1.02
ATM-229ENST00000639953 FAM35AQ86V20 835 aa8.7□□□□□ -1.02
ATM-229ENST00000639953 UBR1Q8IWV7 1749 aa8.7□□□□□ -1.02
ATM-229ENST00000639953 MYO5BQ9ULV0 1848 aa8.7□□□□□ -1.02
ATM-229ENST00000639953 NOS1P29475 1434 aa8.7□□□□□ -1.02
ATM-229ENST00000639953 NLRP1Q9C000 1473 aa8.7□□□□□ -1.02
ATM-229ENST00000639953 EPB42P16452 691 aa8.69□□□□□ -1.02
ATM-229ENST00000639953 ARSDP51689 593 aa8.69□□□□□ -1.02
ATM-229ENST00000639953 IDI1Q13907 227 aa8.69□□□□□ -1.02
ATM-229ENST00000639953 HFE2Q6ZVN8 426 aa8.69□□□□□ -1.02
ATM-229ENST00000639953 MYO19Q96H55 970 aa8.69□□□□□ -1.02
ATM-229ENST00000639953 NACC1Q96RE7 527 aa8.69□□□□□ -1.02
ATM-229ENST00000639953 NOVA2Q9UNW9 492 aaKnown RBP8.69□□□□□ -1.02
ATM-229ENST00000639953 RPRD2Q5VT52 1461 aaKnown RBP8.69□□□□□ -1.02
ATM-229ENST00000639953 SPHKAPQ2M3C7 1700 aa8.68□□□□□ -1.02
ATM-229ENST00000639953 C9orf172C9J069 976 aa8.68□□□□□ -1.02
ATM-229ENST00000639953 FKBP5Q13451 457 aaPredicted RBP8.68□□□□□ -1.02
ATM-229ENST00000639953 GRIK5Q16478 980 aa8.68□□□□□ -1.02
ATM-229ENST00000639953 COX20Q5RI15 118 aa8.68□□□□□ -1.02
ATM-229ENST00000639953 PERM1Q5SV97 790 aa8.68□□□□□ -1.02
ATM-229ENST00000639953 DHX32Q7L7V1 743 aaKnown RBP8.68□□□□□ -1.02
ATM-229ENST00000639953 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
ATM-229ENST00000639953 RTCBQ9Y3I0 505 aaKnown RBP8.68□□□□□ -1.02
ATM-229ENST00000639953 CLSPNQ9HAW4 1339 aa8.68□□□□□ -1.02
ATM-229ENST00000639953 POLR1AO95602 1720 aaPredicted RBP8.68□□□□□ -1.02
ATM-229ENST00000639953 PRMT3O60678 531 aa8.67□□□□□ -1.02
ATM-229ENST00000639953 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
ATM-229ENST00000639953 RARAP10276 462 aa8.67□□□□□ -1.02
ATM-229ENST00000639953 ELNP15502 786 aa8.67□□□□□ -1.02
ATM-229ENST00000639953 ADGRE1Q14246 886 aa8.67□□□□□ -1.02
ATM-229ENST00000639953 CMTR1Q8N1G2 835 aaKnown RBP8.67□□□□□ -1.02
ATM-229ENST00000639953 DYRK3O43781 588 aa8.66□□□□□ -1.02
ATM-229ENST00000639953 MBTPS1Q14703 1052 aa8.66□□□□□ -1.02
ATM-229ENST00000639953 MSL1Q68DK7 614 aa8.66□□□□□ -1.02
ATM-229ENST00000639953 FMR1NBQ8N0W7 255 aaPredicted RBP8.66□□□□□ -1.02
ATM-229ENST00000639953 TRPM4Q8TD43 1214 aa8.66□□□□□ -1.02
ATM-229ENST00000639953 LENG1Q96BZ8 264 aaPredicted RBP8.66□□□□□ -1.02
ATM-229ENST00000639953 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 CLTCL1P53675 1640 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 NEURL4Q96JN8 1562 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 ADGRB3O60242 1522 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 PLA2R1Q13018 1463 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 RAC1P63000 192 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
ATM-229ENST00000639953 ZMYM1Q5SVZ6 1142 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 ELMSAN1Q6PJG2 1045 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
ATM-229ENST00000639953 CAPN12Q6ZSI9 719 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 TREML1Q86YW5 311 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 RGL4Q8IZJ4 473 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 THEMISQ8N1K5 641 aaPredicted RBP8.65□□□□□ -1.02
ATM-229ENST00000639953 MPHOSPH9Q99550 1183 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 SAP130Q9H0E3 1048 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATM-229ENST00000639953 ZMIZ1Q9ULJ6 1067 aa8.65□□□□□ -1.02
ATM-229ENST00000639953 PTPRTO14522 1441 aa8.64□□□□□ -1.03
ATM-229ENST00000639953 J3QW42 95 aa8.64□□□□□ -1.03
ATM-229ENST00000639953 FAM26DQ5JW98 314 aa8.64□□□□□ -1.03
ATM-229ENST00000639953 SLC52A1Q9NWF4 448 aa8.64□□□□□ -1.03
ATM-229ENST00000639953 KDM5AP29375 1690 aaKnown RBP8.64□□□□□ -1.03
ATM-229ENST00000639953 XYLBO75191 536 aa8.63□□□□□ -1.03
ATM-229ENST00000639953 LTKP29376 864 aa8.63□□□□□ -1.03
ATM-229ENST00000639953 SRPK2P78362 688 aaKnown RBP8.63□□□□□ -1.03
ATM-229ENST00000639953 PCSK7Q16549 785 aa8.63□□□□□ -1.03
ATM-229ENST00000639953 HIRIP3Q9BW71 556 aaPredicted RBP8.63□□□□□ -1.03
ATM-229ENST00000639953 SMG9Q9H0W8 520 aaKnown RBP8.63□□□□□ -1.03
ATM-229ENST00000639953 USP21Q9UK80 565 aa8.63□□□□□ -1.03
ATM-229ENST00000639953 KCNMB2Q9Y691 235 aa8.63□□□□□ -1.03
ATM-229ENST00000639953 SLIT1O75093 1534 aa8.63□□□□□ -1.03
ATM-229ENST00000639953 TRPM2O94759 1503 aa8.63□□□□□ -1.03
ATM-229ENST00000639953 PPP1R15AO75807 674 aaPredicted RBP8.62□□□□□ -1.03
ATM-229ENST00000639953 GPLD1P80108 840 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 OCLNQ16625 522 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 PRSS36Q5K4E3 855 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 TXNRD3Q86VQ6 643 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms