RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 PLA2G12BQ9BX93 195 aa16.6■□□□□ 0.25
ATRIP-208ENST00000639561 ZNF277Q9NRM2 450 aaPredicted RBP16.6■□□□□ 0.25
ATRIP-208ENST00000639561 SCN4AP35499 1836 aa16.6■□□□□ 0.25
ATRIP-208ENST00000639561 CREB3L3Q68CJ9 461 aa16.59■□□□□ 0.25
ATRIP-208ENST00000639561 OLFM4Q6UX06 510 aa16.59■□□□□ 0.25
ATRIP-208ENST00000639561 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
ATRIP-208ENST00000639561 RUFY3Q7L099 469 aa16.59■□□□□ 0.25
ATRIP-208ENST00000639561 IL27Q8NEV9 243 aa16.59■□□□□ 0.25
ATRIP-208ENST00000639561 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
ATRIP-208ENST00000639561 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
ATRIP-208ENST00000639561 C3orf67Q6ZVT6 689 aa16.59■□□□□ 0.25
ATRIP-208ENST00000639561 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
ATRIP-208ENST00000639561 LARP6Q9BRS8 491 aaKnown RBP16.59■□□□□ 0.25
ATRIP-208ENST00000639561 CSF1RP07333 972 aa16.58■□□□□ 0.25
ATRIP-208ENST00000639561 COL9A3Q14050 684 aaPredicted RBP16.58■□□□□ 0.25
ATRIP-208ENST00000639561 RFX7Q2KHR2 1363 aa16.58■□□□□ 0.25
ATRIP-208ENST00000639561 A0A1B0GUL7 405 aa16.58■□□□□ 0.24
ATRIP-208ENST00000639561 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
ATRIP-208ENST00000639561 ZSWIM6Q9HCJ5 1215 aa16.58■□□□□ 0.24
ATRIP-208ENST00000639561 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
ATRIP-208ENST00000639561 SLC27A2O14975 620 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
ATRIP-208ENST00000639561 MCTP1Q6DN14 999 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 CHAMP1Q96JM3 812 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
ATRIP-208ENST00000639561 TAF5LO75529 589 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 KCNJ4P48050 445 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 JDP2Q8WYK2 163 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 ATP6V0A2Q9Y487 856 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
ATRIP-208ENST00000639561 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 BBOX1O75936 387 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
ATRIP-208ENST00000639561 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 SEC62Q99442 399 aaKnown RBP16.56■□□□□ 0.24
ATRIP-208ENST00000639561 LIMCH1Q9UPQ0 1083 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
ATRIP-208ENST00000639561 LARGE1O95461 756 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 BRD1O95696 1058 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
ATRIP-208ENST00000639561 PTMSP20962 102 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 VPS53Q5VIR6 699 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 FOXD4L5Q5VV16 416 aaPredicted RBP16.56■□□□□ 0.24
ATRIP-208ENST00000639561 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
ATRIP-208ENST00000639561 FOXD4L4Q8WXT5 416 aaPredicted RBP16.56■□□□□ 0.24
ATRIP-208ENST00000639561 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
ATRIP-208ENST00000639561 MYH3P11055 1940 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 POTECB2RU33 542 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 GOLIM4O00461 696 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 SKOR2Q2VWA4 1001 aaPredicted RBP16.55■□□□□ 0.24
ATRIP-208ENST00000639561 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 SUPT20HQ8NEM7 779 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 CYP46A1Q9Y6A2 500 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 IFIT5Q13325 482 aaKnown RBP16.55■□□□□ 0.24
ATRIP-208ENST00000639561 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 VPS33BQ9H267 617 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 GREM2Q9H772 168 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 PAG1Q9NWQ8 432 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 CEP126Q9P2H0 1117 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
ATRIP-208ENST00000639561 FZD9O00144 591 aa16.54■□□□□ 0.24
ATRIP-208ENST00000639561 GRAPQ13588 217 aa16.54■□□□□ 0.24
ATRIP-208ENST00000639561 SLFNL1Q499Z3 407 aa16.54■□□□□ 0.24
ATRIP-208ENST00000639561 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
ATRIP-208ENST00000639561 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
ATRIP-208ENST00000639561 LRRC37AA6NMS7 1700 aa16.54■□□□□ 0.24
ATRIP-208ENST00000639561 ZNF541Q9H0D2 1346 aa16.54■□□□□ 0.24
ATRIP-208ENST00000639561 CTSWP56202 376 aa16.53■□□□□ 0.24
ATRIP-208ENST00000639561 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
ATRIP-208ENST00000639561 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
ATRIP-208ENST00000639561 IRS4O14654 1257 aaPredicted RBP16.53■□□□□ 0.24
ATRIP-208ENST00000639561 ITGA6P23229 1130 aa16.53■□□□□ 0.24
ATRIP-208ENST00000639561 ADORA1P30542 326 aa16.53■□□□□ 0.24
ATRIP-208ENST00000639561 EIF6P56537 245 aaKnown RBP16.53■□□□□ 0.24
ATRIP-208ENST00000639561 LARGE2Q8N3Y3 721 aa16.53■□□□□ 0.24
ATRIP-208ENST00000639561 SF3B3Q15393 1217 aaKnown RBP16.52■□□□□ 0.24
ATRIP-208ENST00000639561 MCMDC2Q4G0Z9 681 aa16.52■□□□□ 0.24
ATRIP-208ENST00000639561 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
ATRIP-208ENST00000639561 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.23
ATRIP-208ENST00000639561 TAF1P21675 1872 aa16.52■□□□□ 0.23
ATRIP-208ENST00000639561 KLHL40Q2TBA0 621 aa16.52■□□□□ 0.23
ATRIP-208ENST00000639561 RNF20Q5VTR2 975 aa16.52■□□□□ 0.23
ATRIP-208ENST00000639561 GPC2Q8N158 579 aa16.52■□□□□ 0.23
ATRIP-208ENST00000639561 SPEF2Q9C093 1822 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 RIPOR2Q9Y4F9 1068 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 DPP8Q6V1X1 898 aaPredicted RBP16.51■□□□□ 0.23
ATRIP-208ENST00000639561 RTFDC1Q9BY42 306 aaPredicted RBP16.51■□□□□ 0.23
ATRIP-208ENST00000639561 HMG20BQ9P0W2 317 aa16.51■□□□□ 0.23
ATRIP-208ENST00000639561 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
ATRIP-208ENST00000639561 PPIP5K2O43314 1243 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
ATRIP-208ENST00000639561 MPNDQ8N594 471 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms