RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.38
SNIP1-204ENST00000638725 FMNL2Q96PY5 1086 aa12.71□□□□□ -0.38
SNIP1-204ENST00000638725 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.38
SNIP1-204ENST00000638725 A0A1W2PQ27 194 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 A0A1W2PQ64 194 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 A0A1W2PQD8 194 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 FOXO4P98177 505 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 ZRSR1Q15695 479 aaKnown RBP12.7□□□□□ -0.38
SNIP1-204ENST00000638725 RAB11FIP4Q86YS3 637 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 KRT222Q8N1A0 295 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 PPP1R13BQ96KQ4 1090 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 GJB4Q9NTQ9 266 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 IMPACTQ9P2X3 320 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 ARFGEF2Q9Y6D5 1785 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 HAND2P61296 217 aa12.7□□□□□ -0.38
SNIP1-204ENST00000638725 RNF113AO15541 343 aaKnown RBP12.69□□□□□ -0.38
SNIP1-204ENST00000638725 IFIT1P09914 478 aaKnown RBP12.69□□□□□ -0.38
SNIP1-204ENST00000638725 LRRC24Q50LG9 513 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 LRRN4CLQ8ND94 238 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 KIF2AO00139 706 aaPredicted RBP12.69□□□□□ -0.38
SNIP1-204ENST00000638725 SPTLC2O15270 562 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 CCDC150Q8NCX0 1101 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
SNIP1-204ENST00000638725 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
SNIP1-204ENST00000638725 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
SNIP1-204ENST00000638725 SFPQP23246 707 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNIP1-204ENST00000638725 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 ISM2Q6H9L7 571 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 KCNG4Q8TDN1 519 aa12.69□□□□□ -0.38
SNIP1-204ENST00000638725 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 ZNF202O95125 648 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 YEATS4O95619 227 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 NCAPHQ15003 741 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 ERCC6LQ2NKX8 1250 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 ORC3Q9UBD5 711 aaPredicted RBP12.68□□□□□ -0.38
SNIP1-204ENST00000638725 MEGF6O75095 1541 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 NLRP12P59046 1061 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 TERF2Q15554 542 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 IFNL2Q8IZJ0 200 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 L2HGDHQ9H9P8 463 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 ST7Q9NRC1 585 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 ZNF446Q9NWS9 450 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 FAM53CQ9NYF3 392 aa12.68□□□□□ -0.38
SNIP1-204ENST00000638725 A0A1B0GUL7 405 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 GOLGA8BA8MQT2 603 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 H7C1W4 665 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
SNIP1-204ENST00000638725 IL15P40933 162 aaPredicted RBP12.67□□□□□ -0.38
SNIP1-204ENST00000638725 EVCP57679 992 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
SNIP1-204ENST00000638725 FOXP2O15409 715 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 PFKFB1P16118 471 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 ANKLE2Q86XL3 938 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 GPR108Q9NPR9 543 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
SNIP1-204ENST00000638725 PRC1O43663 620 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 ATP1A3P13637 1013 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNIP1-204ENST00000638725 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 AXDND1Q5T1B0 1012 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-204ENST00000638725 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
SNIP1-204ENST00000638725 EYA2O00167 538 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 CYP27B1O15528 508 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 MARCKSP29966 332 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-204ENST00000638725 TPM4P67936 248 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 FANCCQ00597 558 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
SNIP1-204ENST00000638725 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
SNIP1-204ENST00000638725 CCDC93Q567U6 631 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 ANO1Q5XXA6 986 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 MB21D2Q8IYB1 491 aaPredicted RBP12.65□□□□□ -0.38
SNIP1-204ENST00000638725 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 NBPF26B4DH59 902 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 CPLX1O14810 134 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 H2AFXP16104 143 aaPredicted RBP12.65□□□□□ -0.38
SNIP1-204ENST00000638725 ANTXR2P58335 489 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
SNIP1-204ENST00000638725 IMMTQ16891 758 aaKnown RBP12.65□□□□□ -0.38
SNIP1-204ENST00000638725 GORABQ5T7V8 394 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 NBPF14Q5TI25 921 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 NBPF10Q6P3W6 841 aaKnown RBP12.65□□□□□ -0.38
SNIP1-204ENST00000638725 NBPF15Q8N660 670 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 HSD3B7Q9H2F3 369 aa12.65□□□□□ -0.38
SNIP1-204ENST00000638725 CWC25Q9NXE8 425 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms