RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 CHAMP1Q96JM3 812 aa12.45□□□□□ -0.42
PAX6-235ENST00000638629 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
PAX6-235ENST00000638629 TAF1P21675 1872 aa12.45□□□□□ -0.42
PAX6-235ENST00000638629 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
PAX6-235ENST00000638629 ZSCAN22P10073 491 aaPredicted RBP12.45□□□□□ -0.42
PAX6-235ENST00000638629 MCAMP43121 646 aa12.45□□□□□ -0.42
PAX6-235ENST00000638629 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
PAX6-235ENST00000638629 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
PAX6-235ENST00000638629 LIMCH1Q9UPQ0 1083 aa12.45□□□□□ -0.42
PAX6-235ENST00000638629 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
PAX6-235ENST00000638629 UBE2HP62256 183 aa12.44□□□□□ -0.42
PAX6-235ENST00000638629 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
PAX6-235ENST00000638629 ZNF589Q86UQ0 364 aaPredicted RBP12.44□□□□□ -0.42
PAX6-235ENST00000638629 TM6SF1Q9BZW5 370 aa12.44□□□□□ -0.42
PAX6-235ENST00000638629 MED23Q9ULK4 1368 aa12.44□□□□□ -0.42
PAX6-235ENST00000638629 RNF113AO15541 343 aaKnown RBP12.44□□□□□ -0.42
PAX6-235ENST00000638629 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
PAX6-235ENST00000638629 MCMDC2Q4G0Z9 681 aa12.44□□□□□ -0.42
PAX6-235ENST00000638629 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
PAX6-235ENST00000638629 MAP4K1Q92918 833 aa12.44□□□□□ -0.42
PAX6-235ENST00000638629 TNS1Q9HBL0 1735 aaKnown RBP12.44□□□□□ -0.42
PAX6-235ENST00000638629 DYNC1I1O14576 645 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 FLAD1Q8NFF5 587 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 SEC62Q99442 399 aaKnown RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 HELLSQ9NRZ9 838 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 ST5P78524 1137 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 DDR1Q08345 913 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 SLFNL1Q499Z3 407 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 ZSCAN31Q96LW9 406 aaPredicted RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 STX6O43752 255 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 GADD45BO75293 160 aaPredicted RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 AK2P54819 239 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 NECTIN1Q15223 517 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 ZMYM1Q5SVZ6 1142 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
PAX6-235ENST00000638629 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 RBM8AQ9Y5S9 174 aaKnown RBP12.43□□□□□ -0.42
PAX6-235ENST00000638629 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
PAX6-235ENST00000638629 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 F13A1P00488 732 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 KCNJ4P48050 445 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 BCAMP50895 628 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 KIAA2012Q0VF49 1180 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 UBE4AQ14139 1066 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 VPS53Q5VIR6 699 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
PAX6-235ENST00000638629 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
PAX6-235ENST00000638629 RUFY3Q7L099 469 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
PAX6-235ENST00000638629 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
PAX6-235ENST00000638629 TTF1Q15361 905 aaPredicted RBP12.41□□□□□ -0.42
PAX6-235ENST00000638629 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
PAX6-235ENST00000638629 RNF214Q8ND24 703 aa12.41□□□□□ -0.42
PAX6-235ENST00000638629 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
PAX6-235ENST00000638629 ZFYP08048 801 aaPredicted RBP12.41□□□□□ -0.42
PAX6-235ENST00000638629 SYT1P21579 422 aa12.41□□□□□ -0.42
PAX6-235ENST00000638629 GRAPQ13588 217 aa12.41□□□□□ -0.42
PAX6-235ENST00000638629 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
PAX6-235ENST00000638629 SPATA5Q8NB90 893 aa12.41□□□□□ -0.42
PAX6-235ENST00000638629 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
PAX6-235ENST00000638629 CAMKK2Q96RR4 588 aa12.41□□□□□ -0.42
PAX6-235ENST00000638629 ANKRD2Q9GZV1 360 aa12.41□□□□□ -0.42
PAX6-235ENST00000638629 PNPLA7Q6ZV29 1317 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
PAX6-235ENST00000638629 SMC3Q9UQE7 1217 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 UQCRHLA0A096LP55 91 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 UQCRHP07919 91 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 RASGRF1Q13972 1273 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
PAX6-235ENST00000638629 FUCA2Q9BTY2 467 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.4□□□□□ -0.42
PAX6-235ENST00000638629 ZSWIM6Q9HCJ5 1215 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.42
PAX6-235ENST00000638629 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.42
PAX6-235ENST00000638629 SLC27A2O14975 620 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 PIBF1Q8WXW3 757 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 OSBP2Q969R2 916 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
PAX6-235ENST00000638629 A0A1B0GUL6 1792 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 M0R2C6 588 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 PTMAP06454 111 aaKnown RBP12.39□□□□□ -0.43
PAX6-235ENST00000638629 ZKSCAN1P17029 563 aaPredicted RBP12.39□□□□□ -0.43
PAX6-235ENST00000638629 GYG1P46976 350 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 ZSCAN25Q6NSZ9 544 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 MAST3O60307 1309 aa12.39□□□□□ -0.43
PAX6-235ENST00000638629 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
PAX6-235ENST00000638629 PRIMPOLQ96LW4 560 aa12.38□□□□□ -0.43
PAX6-235ENST00000638629 GDPD2Q9HCC8 539 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms