RNA–Protein interactions for RNA: ENST00000638149.1

GABRB3-226, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-226ENST00000638149 PPP2R3BQ9Y5P8 575 aa5.92□□□□□ -1.46
GABRB3-226ENST00000638149 ZNF804BA4D1E1 1349 aa5.92□□□□□ -1.46
GABRB3-226ENST00000638149 TCP10L2B9ZVM9 353 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 HOXD10P28358 340 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 TNNI2P48788 182 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 GTF2A2P52657 109 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 TRIM28Q13263 835 aaKnown RBP5.91□□□□□ -1.46
GABRB3-226ENST00000638149 TNFAIP1Q13829 316 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 RASA3Q14644 834 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 ZNF804AQ7Z570 1209 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 NKX2-3Q8TAU0 364 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 GREM2Q9H772 168 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 BSDC1Q9NW68 430 aaPredicted RBP5.91□□□□□ -1.46
GABRB3-226ENST00000638149 MAP3K2Q9Y2U5 619 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 COL4A1P02462 1669 aa5.91□□□□□ -1.46
GABRB3-226ENST00000638149 COL1A1P02452 1464 aaPredicted RBP5.9□□□□□ -1.46
GABRB3-226ENST00000638149 SPEF2Q9C093 1822 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 CHL1O00533 1208 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 EVI5O60447 810 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 FRAT2O75474 233 aaPredicted RBP5.9□□□□□ -1.46
GABRB3-226ENST00000638149 USP2O75604 605 aaPredicted RBP5.9□□□□□ -1.46
GABRB3-226ENST00000638149 HOXB7P09629 217 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 ITGA6P23229 1130 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 KLRK1P26718 216 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 UBXN2AP68543 259 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 TXNRD3Q86VQ6 643 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 TRIM47Q96LD4 638 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 PTPN18Q99952 460 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 METTL22Q9BUU2 404 aaPredicted RBP5.9□□□□□ -1.46
GABRB3-226ENST00000638149 STK31Q9BXU1 1019 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 CHMP4AQ9BY43 222 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 RNF208Q9H0X6 261 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 CD209Q9NNX6 404 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 TMOD2Q9NZR1 351 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 PCDHAC2Q9Y5I4 1007 aa5.9□□□□□ -1.46
GABRB3-226ENST00000638149 ANKRD18BA2A2Z9 1011 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 SPDYE2BA6NHP3 402 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 UNCXA6NJT0 531 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 TAF5LO75529 589 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 TFRCP02786 760 aaKnown RBP5.89□□□□□ -1.47
GABRB3-226ENST00000638149 SPDYE6P0CI01 402 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 CETPP11597 493 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 GJA5P36382 358 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 PSMC4P43686 418 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 MAP3K9P80192 1104 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 CHRNDQ07001 517 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 MTFR1Q15390 333 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 MAP3K11Q16584 847 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 UBE3BQ7Z3V4 1068 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 VPS37DQ86XT2 251 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 FAM43AQ8N2R8 423 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 HELBQ8NG08 1087 aaPredicted RBP5.89□□□□□ -1.47
GABRB3-226ENST00000638149 TTLL11Q8NHH1 800 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 CNKSR2Q8WXI2 1034 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 PRMT6Q96LA8 375 aaPredicted RBP5.89□□□□□ -1.47
GABRB3-226ENST00000638149 ARHGAP39Q9C0H5 1083 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 TDRD3Q9H7E2 651 aaKnown RBP5.89□□□□□ -1.47
GABRB3-226ENST00000638149 CNNM1Q9NRU3 951 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 CPA4Q9UI42 421 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 TTF2Q9UNY4 1162 aaKnown RBP5.89□□□□□ -1.47
GABRB3-226ENST00000638149 MYPNQ86TC9 1320 aa5.89□□□□□ -1.47
GABRB3-226ENST00000638149 RBBP6Q7Z6E9 1792 aaKnown RBP5.88□□□□□ -1.47
GABRB3-226ENST00000638149 PSME4Q14997 1843 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 FARP2O94887 1054 aaPredicted RBP5.88□□□□□ -1.47
GABRB3-226ENST00000638149 GNRH1P01148 92 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 CCL5P13501 91 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 GRK4P32298 578 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 PRMT2P55345 433 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 LACTBP83111 547 aaPredicted RBP5.88□□□□□ -1.47
GABRB3-226ENST00000638149 CALD1Q05682 793 aaKnown RBP5.88□□□□□ -1.47
GABRB3-226ENST00000638149 SNAPC2Q13487 334 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 VGLL4Q14135 290 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 CWF19L2Q2TBE0 894 aaKnown RBP5.88□□□□□ -1.47
GABRB3-226ENST00000638149 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 BRI3BPQ8WY22 251 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 RUNDC1Q96C34 613 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 WRNIP1Q96S55 665 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 TMEM39BQ9GZU3 492 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 MYH16Q9H6N6 1097 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 MBIPQ9NS73 344 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 ZNF70Q9UC06 446 aaPredicted RBP5.88□□□□□ -1.47
GABRB3-226ENST00000638149 STAP2Q9UGK3 403 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 RIPOR2Q9Y4F9 1068 aa5.88□□□□□ -1.47
GABRB3-226ENST00000638149 TESPA1A2RU30 521 aaPredicted RBP5.87□□□□□ -1.47
GABRB3-226ENST00000638149 SNAP23O00161 211 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 TLR2O60603 784 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 ZEB1P37275 1124 aaPredicted RBP5.87□□□□□ -1.47
GABRB3-226ENST00000638149 GNAI1P63096 354 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 CHAF1AQ13111 956 aaPredicted RBP5.87□□□□□ -1.47
GABRB3-226ENST00000638149 IFIT5Q13325 482 aaKnown RBP5.87□□□□□ -1.47
GABRB3-226ENST00000638149 MFSD14BQ5SR56 506 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 CERS5Q8N5B7 392 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 DEFB123Q8N688 67 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 MTMR14Q8NCE2 650 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 HOOK2Q96ED9 719 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 LRCH3Q96II8 777 aa5.87□□□□□ -1.47
GABRB3-226ENST00000638149 SSC5DA1L4H1 1573 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms