RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 UTP14CQ5TAP6 766 aaKnown RBP16.93■□□□□ 0.3
UBE3A-227ENST00000638011 CALML3P27482 149 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 ERCC5P28715 1186 aaPredicted RBP16.93■□□□□ 0.3
UBE3A-227ENST00000638011 RSPH3Q86UC2 560 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 SEPT8Q92599 483 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 WDHD1O75717 1129 aaPredicted RBP16.93■□□□□ 0.3
UBE3A-227ENST00000638011 METAP2P50579 478 aaKnown RBP eCLIP16.93■□□□□ 0.39e-6■□□□□ 8.1
UBE3A-227ENST00000638011 ARHGAP4P98171 946 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 RNASELQ05823 741 aaKnown RBP16.93■□□□□ 0.3
UBE3A-227ENST00000638011 NUP58Q9BVL2 599 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 POLE3Q9NRF9 147 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 GUCA1BQ9UMX6 200 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 SH3BP5O60239 455 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 ITIH3Q06033 890 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 GEN1Q17RS7 908 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 NAA16Q6N069 864 aaPredicted RBP16.92■□□□□ 0.3
UBE3A-227ENST00000638011 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 LMNB2Q03252 620 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 SEPT2Q15019 361 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 PPP4R1Q8TF05 950 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 PFDN4Q9NQP4 134 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 CCDC122Q5T0U0 273 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 MAN1A2O60476 641 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 IDH1O75874 414 aaKnown RBP16.92■□□□□ 0.3
UBE3A-227ENST00000638011 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 UBXN1Q04323 297 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 SLFN5Q08AF3 891 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 RHOXF2BP0C7M4 288 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 CFAP221Q4G0U5 840 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 RHOXF2Q9BQY4 288 aa16.92■□□□□ 0.3
UBE3A-227ENST00000638011 IDEP14735 1019 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 TBC1D9Q6ZT07 1266 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 TROVE2P10155 538 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 RPL13P26373 211 aaKnown RBP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 NUCKS1Q9H1E3 243 aaKnown RBP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 APBA1Q02410 837 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 GNAQP50148 359 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 TMX1Q9H3N1 280 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 RALGAPBQ86X10 1494 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 CCDC25Q86WR0 208 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 HELBQ8NG08 1087 aaPredicted RBP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 NCOA7Q8NI08 942 aa16.91■□□□□ 0.3
UBE3A-227ENST00000638011 GFM2Q969S9 779 aaKnown RBP16.91■□□□□ 0.3
UBE3A-227ENST00000638011 PLCB3Q01970 1234 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 RASIP1Q5U651 963 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 IFIT3O14879 490 aaKnown RBP16.9■□□□□ 0.3
UBE3A-227ENST00000638011 NOX5Q96PH1 765 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
UBE3A-227ENST00000638011 KRT23Q9C075 422 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 FAM135AQ9P2D6 1515 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 USP6NLQ92738 828 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 TPX2Q9ULW0 747 aaKnown RBP16.9■□□□□ 0.3
UBE3A-227ENST00000638011 TCHHQ07283 1943 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 GOLGA8KD6RF30 607 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 AOPEPQ8N6M6 819 aa16.9■□□□□ 0.3
UBE3A-227ENST00000638011 CHMP2AO43633 222 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 PPP1R21Q6ZMI0 780 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 HSPA8P11142 646 aaKnown RBP16.89■□□□□ 0.29
UBE3A-227ENST00000638011 KIAA1107Q9UPP5 1409 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 CCDC92Q53HC0 331 aaPredicted RBP16.89■□□□□ 0.29
UBE3A-227ENST00000638011 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.29
UBE3A-227ENST00000638011 CTTNBP2NLQ9P2B4 639 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 ARHGAP6O43182 974 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 NEK1Q96PY6 1258 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
UBE3A-227ENST00000638011 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
UBE3A-227ENST00000638011 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
UBE3A-227ENST00000638011 POTEB3A0JP26 581 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 KRT3P12035 628 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 TATP17735 454 aaPredicted RBP16.88■□□□□ 0.29
UBE3A-227ENST00000638011 RRAGBQ5VZM2 374 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 POTEBQ6S5H4 581 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 BAIAP2L1Q9UHR4 511 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 E7EVH7 732 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 MAIP1Q8WWC4 291 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 KAT6AQ92794 2004 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 TXNDC9O14530 226 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 HS2ST1Q7LGA3 356 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 ATP8B1O43520 1251 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 DMTNQ08495 405 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 LZTFL1Q9NQ48 299 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 SCOCQ9UIL1 159 aa16.88■□□□□ 0.29
UBE3A-227ENST00000638011 PSMD7P51665 324 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 MFSD6Q6ZSS7 791 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 ORC6Q9Y5N6 252 aa16.87■□□□□ 0.29
UBE3A-227ENST00000638011 HOXA7P31268 230 aaPredicted RBP16.87■□□□□ 0.29
UBE3A-227ENST00000638011 PPM1FP49593 454 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms