RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 KIAA2012Q0VF49 1180 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 SLC9C2Q5TAH2 1124 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 ARHGAP27Q6ZUM4 889 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 CATIPQ7Z7H3 387 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 CABP5Q9NP86 173 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 TNNQ9UQP3 1299 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 KDM2BQ8NHM5 1336 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 SLC4A3P48751 1232 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 CCDC12Q8WUD4 166 aaPredicted RBP6.46□□□□□ -1.37
CHD2-227ENST00000637572 ESR2Q92731 530 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 CNKSR1Q969H4 720 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 CCDC43Q96MW1 224 aaKnown RBP6.46□□□□□ -1.37
CHD2-227ENST00000637572 RBM27Q9P2N5 1060 aaKnown RBP6.46□□□□□ -1.37
CHD2-227ENST00000637572 CEP131Q9UPN4 1083 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 ZBTB1Q9Y2K1 713 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 SLC12A7Q9Y666 1083 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 LDHBP07195 334 aaKnown RBP6.46□□□□□ -1.37
CHD2-227ENST00000637572 GNAQP50148 359 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 TPD52L1Q16890 204 aaPredicted RBP6.46□□□□□ -1.37
CHD2-227ENST00000637572 TTLL7Q6ZT98 887 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 NUP133Q8WUM0 1156 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 SNRKQ9NRH2 765 aa6.46□□□□□ -1.37
CHD2-227ENST00000637572 SPATA31A5Q5VU36 1347 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 SPATA31A7Q8IWB4 1347 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 HCLS1P14317 486 aaPredicted RBP6.46□□□□□ -1.38
CHD2-227ENST00000637572 ATP5JP18859 108 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 MSNP26038 577 aaKnown RBP6.46□□□□□ -1.38
CHD2-227ENST00000637572 SSFA2P28290 1259 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 MSL1Q68DK7 614 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 CC2D2BQ6DHV5 1058 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 NAT10Q9H0A0 1025 aaKnown RBP6.46□□□□□ -1.38
CHD2-227ENST00000637572 SEC63Q9UGP8 760 aaKnown RBP6.46□□□□□ -1.38
CHD2-227ENST00000637572 NRKQ7Z2Y5 1582 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 ATP2B4P23634 1241 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 ATP2B2Q01814 1243 aa6.46□□□□□ -1.38
CHD2-227ENST00000637572 MAGEB6P1A0A0J9YX57 407 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 IFIT3O14879 490 aaKnown RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 MAP3K7O43318 606 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 TRIM28Q13263 835 aaKnown RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 STK38Q15208 465 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 DNTTIP2Q5QJE6 756 aaKnown RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 RC3H1Q5TC82 1133 aaKnown RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 CCAR1Q8IX12 1150 aaKnown RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 ATP10DQ9P241 1426 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 RANBP6O60518 1105 aaKnown RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 TPM1P09493 284 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 CALM1P0DP23 149 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 CALM2P0DP24 149 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 CALM3P0DP25 149 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 UBE4AQ14139 1066 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 GRIPAP1Q4V328 841 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 SASS6Q6UVJ0 657 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 KBTBD3Q8NAB2 608 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 HOOK2Q96ED9 719 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 XAGE2Q96GT9 111 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 IBTKQ9P2D0 1353 aaPredicted RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 CCDC171Q6TFL3 1326 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 KINO60870 393 aaKnown RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 BBOX1O75936 387 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 UFL1O94874 794 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 DPP8Q6V1X1 898 aaPredicted RBP6.45□□□□□ -1.38
CHD2-227ENST00000637572 APPBP2Q92624 585 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 SLC4A4Q9Y6R1 1079 aa6.45□□□□□ -1.38
CHD2-227ENST00000637572 PNMA6EA0A0J9YXQ4 647 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 CCDC85CA6NKD9 419 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 IGSF3O75054 1194 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 CHMLP26374 656 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 TTC6Q86TZ1 520 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 KNDC1Q76NI1 1749 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 CEMIPQ8WUJ3 1361 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 TSPY2A6NKD2 308 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 TNNI2P48788 182 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 NT5C2P49902 561 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 USPL1Q5W0Q7 1092 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 DPY19L2Q6NUT2 758 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 NLRP10Q86W26 655 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 SNX21Q969T3 373 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 FHDC1Q9C0D6 1143 aaPredicted RBP6.44□□□□□ -1.38
CHD2-227ENST00000637572 EHMT1Q9H9B1 1298 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 NARFQ9UHQ1 456 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 RBM8AQ9Y5S9 174 aaKnown RBP6.44□□□□□ -1.38
CHD2-227ENST00000637572 SIGLEC1Q9BZZ2 1709 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 MTX1Q13505 466 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 REPIN1Q9BWE0 567 aaKnown RBP6.44□□□□□ -1.38
CHD2-227ENST00000637572 SCAND2PQ9GZW5 306 aaPredicted RBP6.44□□□□□ -1.38
CHD2-227ENST00000637572 CDHR2Q9BYE9 1310 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 MPHOSPH10O00566 681 aaKnown RBP6.44□□□□□ -1.38
CHD2-227ENST00000637572 TSR1Q2NL82 804 aaKnown RBP6.44□□□□□ -1.38
CHD2-227ENST00000637572 TMEM67Q5HYA8 995 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 SDF4Q9BRK5 362 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 KAT14Q9H8E8 782 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 FAM13BQ9NYF5 915 aa6.44□□□□□ -1.38
CHD2-227ENST00000637572 IFT172Q9UG01 1749 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 GOLGA8AA7E2F4 631 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 GOLGA8BA8MQT2 603 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 H7C1W4 665 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 STK3Q13188 491 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 NMIQ13287 307 aaPredicted RBP6.43□□□□□ -1.38
CHD2-227ENST00000637572 DHX8Q14562 1220 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms