RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 GPR101Q96P66 508 aaPredicted RBP15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 GBP4Q96PP9 640 aa15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 PPP1R1BQ9UD71 204 aaPredicted RBP15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 MAST2Q6P0Q8 1798 aa15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 MAP4K4O95819 1239 aaPredicted RBP15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 KLHL34Q8N239 644 aa15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
CNTNAP2-220ENST00000637555 ZBTB22O15209 634 aa15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 MCAMP43121 646 aa15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 CC2D2BQ6DHV5 1058 aa15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 RTFDC1Q9BY42 306 aaPredicted RBP15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 C21orf2O43822 256 aa15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 UQCRFS1P1P0C7P4 283 aa15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 NDUFB9Q9Y6M9 179 aa15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 SCN9AQ15858 1988 aa15.34■□□□□ 0.05
CNTNAP2-220ENST00000637555 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.05
CNTNAP2-220ENST00000637555 CASC1Q6TDU7 716 aa15.33■□□□□ 0.05
CNTNAP2-220ENST00000637555 DPP8Q6V1X1 898 aaPredicted RBP15.33■□□□□ 0.05
CNTNAP2-220ENST00000637555 FHDC1Q9C0D6 1143 aaPredicted RBP15.33■□□□□ 0.05
CNTNAP2-220ENST00000637555 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.33■□□□□ 0.05
CNTNAP2-220ENST00000637555 PI16Q6UXB8 463 aa15.33■□□□□ 0.04
CNTNAP2-220ENST00000637555 EDC3Q96F86 508 aaKnown RBP15.33■□□□□ 0.04
CNTNAP2-220ENST00000637555 CHAMP1Q96JM3 812 aa15.33■□□□□ 0.04
CNTNAP2-220ENST00000637555 RASGRF1Q13972 1273 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 CAVIN4Q5BKX8 364 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 DALRD3Q5D0E6 543 aaKnown RBP15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 GRPEL1Q9HAV7 217 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 HMG20BQ9P0W2 317 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 REC8O95072 547 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 CLEC17AQ6ZS10 378 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 DNAJC2Q99543 621 aaKnown RBP15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 IL25Q9H293 177 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 PALD1Q9ULE6 856 aa15.32■□□□□ 0.04
CNTNAP2-220ENST00000637555 CYP2E1P05181 493 aaPredicted RBP15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 ZAP70P43403 619 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 GRIPAP1Q4V328 841 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 CNTROBQ8N137 903 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 SNRKQ9NRH2 765 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 PAG1Q9NWQ8 432 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 DICER1Q9UPY3 1922 aaKnown RBP15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 SBF1O95248 1867 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 COL4A5P29400 1685 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 MRE11P49959 708 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 RILPL2Q969X0 211 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 ZDHHC9Q9Y397 364 aa15.31■□□□□ 0.04
CNTNAP2-220ENST00000637555 PDS5AQ29RF7 1337 aaKnown RBP15.3■□□□□ 0.04
CNTNAP2-220ENST00000637555 RFX7Q2KHR2 1363 aa15.3■□□□□ 0.04
CNTNAP2-220ENST00000637555 SPATA5Q8NB90 893 aa15.3■□□□□ 0.04
CNTNAP2-220ENST00000637555 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
CNTNAP2-220ENST00000637555 ESYT1Q9BSJ8 1104 aa15.3■□□□□ 0.04
CNTNAP2-220ENST00000637555 GOLIM4O00461 696 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 SEMA3EO15041 775 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 CHMLP26374 656 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 ZNF804AQ7Z570 1209 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 RTKN2Q8IZC4 609 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 PSMD1Q99460 953 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 GNL3LQ9NVN8 582 aaKnown RBP15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 WWC3Q9ULE0 1092 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 IQSEC3Q9UPP2 1182 aaPredicted RBP15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 IL1R1P14778 569 aa15.29■□□□□ 0.04
CNTNAP2-220ENST00000637555 FKBP4Q02790 459 aaKnown RBP eCLIP15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 VPS37DQ86XT2 251 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 KBTBD3Q8NAB2 608 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 EYA3Q99504 573 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 PIH1D3Q9NQM4 214 aaKnown RBP15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 RIMBP2O15034 1052 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 ST18O60284 1047 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 NEK4P51957 841 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 WASHC4Q2M389 1173 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 MCTP1Q6DN14 999 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 DENND2AQ9ULE3 1009 aa15.28■□□□□ 0.04
CNTNAP2-220ENST00000637555 SUPT20HQ8NEM7 779 aa15.27■□□□□ 0.04
CNTNAP2-220ENST00000637555 BCS1LQ9Y276 419 aa15.27■□□□□ 0.04
CNTNAP2-220ENST00000637555 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.03
CNTNAP2-220ENST00000637555 ZC3H12CQ9C0D7 883 aaKnown RBP15.27■□□□□ 0.03
CNTNAP2-220ENST00000637555 COA1Q9GZY4 146 aa15.27■□□□□ 0.03
CNTNAP2-220ENST00000637555 KIAA2012Q0VF49 1180 aa15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 FSD1Q9BTV5 496 aa15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 MYH2Q9UKX2 1941 aa15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 NFKBIEO00221 500 aa15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
CNTNAP2-220ENST00000637555 CHGBP05060 677 aa15.25■□□□□ 0.03
CNTNAP2-220ENST00000637555 NUCB2P80303 420 aa15.25■□□□□ 0.03
CNTNAP2-220ENST00000637555 TTF1Q15361 905 aaPredicted RBP15.25■□□□□ 0.03
CNTNAP2-220ENST00000637555 AOC3Q16853 763 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms