RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 ARHGEF1Q92888 912 aaKnown RBP22.2■■□□□ 1.14
CLN5-219ENST00000637537 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.14
CLN5-219ENST00000637537 WWC3Q9ULE0 1092 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 MYH7P12883 1935 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 TCHHQ07283 1943 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 LAMA4Q16363 1823 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 HSP90B1P14625 803 aaKnown RBP22.19■■□□□ 1.14
CLN5-219ENST00000637537 ADD2P35612 726 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 SPATA5Q8NB90 893 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 BRF1Q92994 677 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 IQSEC3Q9UPP2 1182 aaPredicted RBP22.19■■□□□ 1.14
CLN5-219ENST00000637537 FGAP02671 866 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 FGD1P98174 961 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 GPT2Q8TD30 523 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 SETDB2Q96T68 719 aa22.19■■□□□ 1.14
CLN5-219ENST00000637537 NSFL1CQ9UNZ2 370 aaKnown RBP22.19■■□□□ 1.14
CLN5-219ENST00000637537 ZSCAN22P10073 491 aaPredicted RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 NASPP49321 788 aaPredicted RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 ALDH8A1Q9H2A2 487 aaPredicted RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 TRPC5Q9UL62 973 aaPredicted RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 LAMB2P55268 1798 aa22.18■■□□□ 1.14
CLN5-219ENST00000637537 UQCRFS1P1P0C7P4 283 aa22.18■■□□□ 1.14
CLN5-219ENST00000637537 TTF1Q15361 905 aaPredicted RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 CAVIN1Q6NZI2 390 aaKnown RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 CDC5LQ99459 802 aaKnown RBP22.18■■□□□ 1.14
CLN5-219ENST00000637537 ZNF532Q9HCE3 1301 aa22.18■■□□□ 1.14
CLN5-219ENST00000637537 RTL9Q8NET4 1388 aa22.18■■□□□ 1.14
CLN5-219ENST00000637537 NBPF5PQ86XG9 351 aaPredicted RBP22.17■■□□□ 1.14
CLN5-219ENST00000637537 CELF1Q92879 486 aaKnown RBP22.17■■□□□ 1.14
CLN5-219ENST00000637537 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
CLN5-219ENST00000637537 DHX32Q7L7V1 743 aaKnown RBP22.17■■□□□ 1.14
CLN5-219ENST00000637537 ANKRD18AQ8IVF6 992 aa22.17■■□□□ 1.14
CLN5-219ENST00000637537 LRRC4BQ9NT99 713 aa22.17■■□□□ 1.14
CLN5-219ENST00000637537 PDE6AP16499 860 aa22.16■■□□□ 1.14
CLN5-219ENST00000637537 QTRT2Q9H974 415 aaKnown RBP22.16■■□□□ 1.14
CLN5-219ENST00000637537 SBF2Q86WG5 1849 aa22.16■■□□□ 1.14
CLN5-219ENST00000637537 SCN7AQ01118 1682 aa22.16■■□□□ 1.14
CLN5-219ENST00000637537 VPS37CA5D8V6 355 aaPredicted RBP22.16■■□□□ 1.14
CLN5-219ENST00000637537 ONECUT3O60422 494 aaPredicted RBP22.16■■□□□ 1.14
CLN5-219ENST00000637537 SF3B3Q15393 1217 aaKnown RBP22.16■■□□□ 1.14
CLN5-219ENST00000637537 RBM27Q9P2N5 1060 aaKnown RBP22.16■■□□□ 1.14
CLN5-219ENST00000637537 TPRNQ4KMQ1 711 aa22.15■■□□□ 1.14
CLN5-219ENST00000637537 FAM196AQ6ZSG2 479 aa22.15■■□□□ 1.14
CLN5-219ENST00000637537 MTMR6Q9Y217 621 aa22.15■■□□□ 1.14
CLN5-219ENST00000637537 CASZ1Q86V15 1759 aa22.14■■□□□ 1.14
CLN5-219ENST00000637537 ARAP2Q8WZ64 1704 aa22.14■■□□□ 1.14
CLN5-219ENST00000637537 ATRNO75882 1429 aa22.14■■□□□ 1.14
CLN5-219ENST00000637537 JAK2O60674 1132 aa22.14■■□□□ 1.14
CLN5-219ENST00000637537 F13A1P00488 732 aa22.14■■□□□ 1.14
CLN5-219ENST00000637537 APOBRQ0VD83 1088 aa22.14■■□□□ 1.14
CLN5-219ENST00000637537 ZSCAN25Q6NSZ9 544 aa22.14■■□□□ 1.14
CLN5-219ENST00000637537 GYG1P46976 350 aa22.14■■□□□ 1.13
CLN5-219ENST00000637537 LARP1BQ659C4 914 aaKnown RBP22.14■■□□□ 1.13
CLN5-219ENST00000637537 MAGEB6Q8N7X4 407 aa22.14■■□□□ 1.13
CLN5-219ENST00000637537 TAF1LQ8IZX4 1826 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 TCRBV5S4A2TA0A5A2 114 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 APPP05067 770 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 HMGB1P09429 215 aaKnown RBP22.13■■□□□ 1.13
CLN5-219ENST00000637537 EXOSC10Q01780 885 aaKnown RBP22.13■■□□□ 1.13
CLN5-219ENST00000637537 IMMTQ16891 758 aaKnown RBP22.13■■□□□ 1.13
CLN5-219ENST00000637537 GPHNQ9NQX3 736 aaPredicted RBP22.13■■□□□ 1.13
CLN5-219ENST00000637537 CNPY2Q9Y2B0 182 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 RFC4P35249 363 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 UBE3CQ15386 1083 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 HS1BP3Q53T59 392 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 GTF3C6Q969F1 213 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 PRDM4Q9UKN5 801 aa22.13■■□□□ 1.13
CLN5-219ENST00000637537 PPFIA3O75145 1194 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 MSNP26038 577 aaKnown RBP22.12■■□□□ 1.13
CLN5-219ENST00000637537 MAP7D2Q96T17 732 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 CTNNA3Q9UI47 895 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 NAP1L2Q9ULW6 460 aaPredicted RBP22.12■■□□□ 1.13
CLN5-219ENST00000637537 MINPP1Q9UNW1 487 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 LY75O60449 1722 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 GADD45BO75293 160 aaPredicted RBP22.12■■□□□ 1.13
CLN5-219ENST00000637537 SCRN1Q12765 414 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 USP48Q86UV5 1035 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 ANP32BQ92688 251 aaKnown RBP22.12■■□□□ 1.13
CLN5-219ENST00000637537 NLRP3Q96P20 1036 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 BSDC1Q9NW68 430 aaPredicted RBP22.12■■□□□ 1.13
CLN5-219ENST00000637537 DENND2AQ9ULE3 1009 aa22.12■■□□□ 1.13
CLN5-219ENST00000637537 NPHP1O15259 732 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 SLC10A5Q5PT55 438 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 CDC37L1Q7L3B6 337 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 FERMT3Q86UX7 667 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 NYXQ9GZU5 481 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 TPTE2Q6XPS3 522 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 DDX11Q96FC9 970 aa22.11■■□□□ 1.13
CLN5-219ENST00000637537 CCT2P78371 535 aaKnown RBP22.1■■□□□ 1.13
CLN5-219ENST00000637537 AIDAQ96BJ3 306 aa22.1■■□□□ 1.13
CLN5-219ENST00000637537 ZNF213O14771 459 aa22.1■■□□□ 1.13
CLN5-219ENST00000637537 MAP3K12Q12852 859 aa22.1■■□□□ 1.13
CLN5-219ENST00000637537 SLC51AQ86UW1 340 aa22.1■■□□□ 1.13
CLN5-219ENST00000637537 BCL11BQ9C0K0 894 aaPredicted RBP22.1■■□□□ 1.13
CLN5-219ENST00000637537 C4BP0C0L5 1744 aa22.09■■□□□ 1.13
CLN5-219ENST00000637537 NKX2-3Q8TAU0 364 aa22.09■■□□□ 1.13
CLN5-219ENST00000637537 NCOA5Q9HCD5 579 aaKnown RBP22.09■■□□□ 1.13
CLN5-219ENST00000637537 KLRK1P26718 216 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms