RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 SLC10A3P09131 477 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 TMPOP42166 694 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 RPS8P62241 208 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 KIF4BQ2VIQ3 1234 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 PADI6Q6TGC4 694 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 TBC1D16Q8TBP0 767 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 ZDHHC16Q969W1 377 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 ISCA1Q9BUE6 129 aa11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 ZC3H12CQ9C0D7 883 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-236ENST00000637117 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 ATP5J2-PTCD1G3V325 749 aa11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 NUDT7P0C024 238 aa11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 CTU1Q7Z7A3 348 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 CDCA5Q96FF9 252 aa11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 GGA3Q9NZ52 723 aa11.96□□□□□ -0.49
CACNA1A-236ENST00000637117 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.5
CACNA1A-236ENST00000637117 ASTN2O75129 1339 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-236ENST00000637117 CHL1O00533 1208 aa11.95□□□□□ -0.5
CACNA1A-236ENST00000637117 C6orf132Q5T0Z8 1188 aa11.95□□□□□ -0.5
CACNA1A-236ENST00000637117 METTL3Q86U44 580 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-236ENST00000637117 ZMYND15Q9H091 742 aa11.95□□□□□ -0.5
CACNA1A-236ENST00000637117 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
CACNA1A-236ENST00000637117 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-236ENST00000637117 SCARF1Q14162 830 aa11.94□□□□□ -0.5
CACNA1A-236ENST00000637117 ANGEL2Q5VTE6 544 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-236ENST00000637117 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
CACNA1A-236ENST00000637117 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
CACNA1A-236ENST00000637117 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
CACNA1A-236ENST00000637117 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-236ENST00000637117 OATP04181 439 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 FKBP1BP68106 108 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 TRIM28Q13263 835 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 PRPF38BQ5VTL8 546 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 AGBL3Q8NEM8 1001 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 SEC31BQ9NQW1 1179 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 LRRC37AA6NMS7 1700 aa11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 TNRC18O15417 2968 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-236ENST00000637117 UFL1O94874 794 aa11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 PKN2Q16513 984 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 RSBN1LQ6PCB5 846 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 HOMEZQ8IX15 550 aa11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 GGA1Q9UJY5 639 aa11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 HDAC9Q9UKV0 1011 aa11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
CACNA1A-236ENST00000637117 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 TBC1D8O95759 1140 aa11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 USP17L8P0C7I0 530 aa11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 SH3D19Q5HYK7 790 aa11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 MOB2Q70IA6 237 aa11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
CACNA1A-236ENST00000637117 SCN9AQ15858 1988 aa11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 HOXB7P09629 217 aa11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 ZNF296Q8WUU4 475 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 GMLQ99445 158 aa11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 SCAF8Q9UPN6 1271 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 COL4A1P02462 1669 aa11.9□□□□□ -0.5
CACNA1A-236ENST00000637117 PITPNM2Q9BZ72 1349 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 TM4SF4P48230 202 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 FLIIQ13045 1269 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 CCDC152Q4G0S7 254 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 PRAMEF18Q5VWM3 479 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 CCDC146Q8IYE0 955 aa11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-236ENST00000637117 GPR25O00155 361 aa11.88□□□□□ -0.51
CACNA1A-236ENST00000637117 PDE8AO60658 829 aa11.88□□□□□ -0.51
CACNA1A-236ENST00000637117 ATP2B4P23634 1241 aa11.88□□□□□ -0.51
CACNA1A-236ENST00000637117 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
CACNA1A-236ENST00000637117 TTC13Q8NBP0 860 aa11.88□□□□□ -0.51
CACNA1A-236ENST00000637117 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-236ENST00000637117 ZNF609O15014 1411 aa11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 RALBP1Q15311 655 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms