RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CYP21A2P08686 494 aa13.65□□□□□ -0.22
CLN6-217ENST00000636964 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
CLN6-217ENST00000636964 CLEC17AQ6ZS10 378 aa13.65□□□□□ -0.22
CLN6-217ENST00000636964 FAM196AQ6ZSG2 479 aa13.65□□□□□ -0.22
CLN6-217ENST00000636964 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
CLN6-217ENST00000636964 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
CLN6-217ENST00000636964 DNTTIP2Q5QJE6 756 aaKnown RBP13.65□□□□□ -0.22
CLN6-217ENST00000636964 BLOC1S2Q6QNY1 142 aa13.65□□□□□ -0.22
CLN6-217ENST00000636964 LPIN2Q92539 896 aa13.65□□□□□ -0.22
CLN6-217ENST00000636964 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
CLN6-217ENST00000636964 ATRNO75882 1429 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 ZNF445P59923 1031 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 FGFR2P21802 821 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 PSMA5P28066 241 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 NBPF5PQ86XG9 351 aaPredicted RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 CCDC83Q8IWF9 413 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 NECAB1Q8N987 351 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 CHRNDQ07001 517 aa13.64□□□□□ -0.23
CLN6-217ENST00000636964 PIH1D3Q9NQM4 214 aaKnown RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
CLN6-217ENST00000636964 COL4A1P02462 1669 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
CLN6-217ENST00000636964 CICQ96RK0 1608 aaPredicted RBP13.63□□□□□ -0.23
CLN6-217ENST00000636964 NPHP1O15259 732 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 TRIM37O94972 964 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 CLSTN1O94985 981 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 SLC5A1P13866 664 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 RFC4P35249 363 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 BCAMP50895 628 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 MCTP1Q6DN14 999 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
CLN6-217ENST00000636964 IQSEC3Q9UPP2 1182 aaPredicted RBP13.63□□□□□ -0.23
CLN6-217ENST00000636964 TAF1P21675 1872 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 LRRC2Q9BYS8 371 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 TPCN1Q9ULQ1 816 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
CLN6-217ENST00000636964 RPAP1Q9BWH6 1393 aaPredicted RBP13.63□□□□□ -0.23
CLN6-217ENST00000636964 DMTNQ08495 405 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 ME3Q16798 604 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 HS1BP3Q53T59 392 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 RPS6KB1P23443 525 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 CELF1Q92879 486 aaKnown RBP13.62□□□□□ -0.23
CLN6-217ENST00000636964 DYNC1I1O14576 645 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 TSC1Q92574 1164 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 NEK1Q96PY6 1258 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
CLN6-217ENST00000636964 ZKSCAN5Q9Y2L8 839 aa13.62□□□□□ -0.23
CLN6-217ENST00000636964 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 PTMSP20962 102 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 STK3Q13188 491 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 CAVIN1Q6NZI2 390 aaKnown RBP13.61□□□□□ -0.23
CLN6-217ENST00000636964 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
CLN6-217ENST00000636964 HAND2P61296 217 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 RASGRF1Q13972 1273 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 LMBRD1Q9NUN5 540 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 BCORQ6W2J9 1755 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 ZNF710Q8N1W2 664 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 RBM27Q9P2N5 1060 aaKnown RBP13.61□□□□□ -0.23
CLN6-217ENST00000636964 WWC3Q9ULE0 1092 aa13.61□□□□□ -0.23
CLN6-217ENST00000636964 ARID4AP29374 1257 aaPredicted RBP13.6□□□□□ -0.23
CLN6-217ENST00000636964 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
CLN6-217ENST00000636964 SF3B3Q15393 1217 aaKnown RBP13.6□□□□□ -0.23
CLN6-217ENST00000636964 TSGA10IPQ3SY00 556 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 SPATA5Q8NB90 893 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 NLRP3Q96P20 1036 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 AKAP11Q9UKA4 1901 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 UQCRFS1P1P0C7P4 283 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
CLN6-217ENST00000636964 TPTE2Q6XPS3 522 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 CHST3Q7LGC8 479 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
CLN6-217ENST00000636964 APPBP2Q92624 585 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLN6-217ENST00000636964 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 ZNF831Q5JPB2 1677 aa13.6□□□□□ -0.23
CLN6-217ENST00000636964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
CLN6-217ENST00000636964 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
CLN6-217ENST00000636964 ZNF532Q9HCE3 1301 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 FOXP2O15409 715 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms