RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 SCN4AP35499 1836 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 FAM205AQ6ZU69 1335 aa10.11□□□□□ -0.79
PNKP-226ENST00000636840 WDR90Q96KV7 1748 aa10.11□□□□□ -0.79
PNKP-226ENST00000636840 UQCRFS1P1P0C7P4 283 aa10.11□□□□□ -0.79
PNKP-226ENST00000636840 CLASRPQ8N2M8 674 aaKnown RBP10.11□□□□□ -0.79
PNKP-226ENST00000636840 ZGPATQ8N5A5 531 aaKnown RBP10.11□□□□□ -0.79
PNKP-226ENST00000636840 DCPSQ96C86 337 aaKnown RBP10.11□□□□□ -0.79
PNKP-226ENST00000636840 KIF1BPQ96EK5 621 aa10.11□□□□□ -0.79
PNKP-226ENST00000636840 XAGE2Q96GT9 111 aa10.11□□□□□ -0.79
PNKP-226ENST00000636840 GMLQ99445 158 aa10.11□□□□□ -0.79
PNKP-226ENST00000636840 IRS2Q9Y4H2 1338 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 COL4A5P29400 1685 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 MYO1BO43795 1136 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 RBM5P52756 815 aaKnown RBP eCLIP10.1□□□□□ -0.79
PNKP-226ENST00000636840 ZNF280AP59817 542 aaPredicted RBP10.1□□□□□ -0.79
PNKP-226ENST00000636840 DLGAP5Q15398 846 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 TBC1D10BQ4KMP7 808 aaPredicted RBP10.1□□□□□ -0.79
PNKP-226ENST00000636840 MFSD14BQ5SR56 506 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 SPTY2D1Q68D10 685 aaPredicted RBP10.1□□□□□ -0.79
PNKP-226ENST00000636840 CCDC102BQ68D86 513 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 CDC37L1Q7L3B6 337 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 SAMD7Q7Z3H4 446 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 KIAA0825Q8IV33 1275 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 CNTROBQ8N137 903 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 CRBNQ96SW2 442 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 MYOZ2Q9NPC6 264 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 IQSEC3Q9UPP2 1182 aaPredicted RBP10.1□□□□□ -0.79
PNKP-226ENST00000636840 EXOC6BQ9Y2D4 811 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 LTBP1Q14766 1721 aa10.1□□□□□ -0.79
PNKP-226ENST00000636840 APBB1O00213 710 aa10.09□□□□□ -0.79
PNKP-226ENST00000636840 KIF4BQ2VIQ3 1234 aa10.09□□□□□ -0.79
PNKP-226ENST00000636840 TNNI3KQ59H18 835 aa10.09□□□□□ -0.79
PNKP-226ENST00000636840 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
PNKP-226ENST00000636840 RHPN1Q8TCX5 695 aa10.09□□□□□ -0.79
PNKP-226ENST00000636840 PGAP2Q9UHJ9 254 aa10.09□□□□□ -0.79
PNKP-226ENST00000636840 FPGT-TNNI3KV9GXZ4 949 aa10.09□□□□□ -0.79
PNKP-226ENST00000636840 MAST3O60307 1309 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 F8W031 263 aaPredicted RBP10.08□□□□□ -0.8
PNKP-226ENST00000636840 ZBTB22O15209 634 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 IFIT2P09913 472 aaKnown RBP10.08□□□□□ -0.8
PNKP-226ENST00000636840 HSPA6P17066 643 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 PHKA1P46020 1223 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 SCARF1Q14162 830 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 MAP1SQ66K74 1059 aaPredicted RBP10.08□□□□□ -0.8
PNKP-226ENST00000636840 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 SIRT2Q8IXJ6 389 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 MXD3Q9BW11 206 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 RWDD1Q9H446 243 aaPredicted RBP10.08□□□□□ -0.8
PNKP-226ENST00000636840 TTF2Q9UNY4 1162 aaKnown RBP10.08□□□□□ -0.8
PNKP-226ENST00000636840 JAG2Q9Y219 1238 aa10.08□□□□□ -0.8
PNKP-226ENST00000636840 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
PNKP-226ENST00000636840 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 POTEJP0CG39 1038 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 ADORA1P30542 326 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 APLP1P51693 650 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
PNKP-226ENST00000636840 HDLBPQ00341 1268 aaKnown RBP10.07□□□□□ -0.8
PNKP-226ENST00000636840 AACSQ86V21 672 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 TRPM4Q8TD43 1214 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 LRRCC1Q9C099 1032 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 CCDC8Q9H0W5 538 aaPredicted RBP10.07□□□□□ -0.8
PNKP-226ENST00000636840 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 DCTPP1Q9H773 170 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 SERPINA10Q9UK55 444 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 ZNF609O15014 1411 aa10.07□□□□□ -0.8
PNKP-226ENST00000636840 SHTN1A0MZ66 631 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 IGSF3O75054 1194 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 CENPBP07199 599 aaPredicted RBP10.06□□□□□ -0.8
PNKP-226ENST00000636840 LDHCP07864 332 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 ERICH6Q7L0X2 663 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 KRT26Q7Z3Y9 468 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 CERS5Q8N5B7 392 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 MTMR14Q8NCE2 650 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 EAF2Q96CJ1 260 aaPredicted RBP10.06□□□□□ -0.8
PNKP-226ENST00000636840 IL1RAPL2Q9NP60 686 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 ABCF2Q9UG63 623 aa10.06□□□□□ -0.8
PNKP-226ENST00000636840 PDS5AQ29RF7 1337 aaKnown RBP10.06□□□□□ -0.8
PNKP-226ENST00000636840 SCN9AQ15858 1988 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 WNT10BO00744 389 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
PNKP-226ENST00000636840 ARID4AP29374 1257 aaPredicted RBP10.05□□□□□ -0.8
PNKP-226ENST00000636840 NF2P35240 595 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 GSTO1P78417 241 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 APOBEC3FQ8IUX4 373 aaKnown RBP10.05□□□□□ -0.8
PNKP-226ENST00000636840 SPATA5Q8NB90 893 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 GCC1Q96CN9 775 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 ZNF512BQ96KM6 892 aaPredicted RBP10.05□□□□□ -0.8
PNKP-226ENST00000636840 DBNDD2Q9BQY9 259 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 TMOD2Q9NZR1 351 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 LRP2BPQ9P2M1 347 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 PITPNM2Q9BZ72 1349 aa10.05□□□□□ -0.8
PNKP-226ENST00000636840 SALL1Q9NSC2 1324 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms