RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 SPEF2Q9C093 1822 aa25.12■■□□□ 1.61
CLN5-215ENST00000636767 CHMP4CQ96CF2 233 aa25.12■■□□□ 1.61
CLN5-215ENST00000636767 KIAA1468Q9P260 1216 aa25.12■■□□□ 1.61
CLN5-215ENST00000636767 IMPACTQ9P2X3 320 aa25.12■■□□□ 1.61
CLN5-215ENST00000636767 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.12■■□□□ 1.61
CLN5-215ENST00000636767 V9GYY5 206 aaPredicted RBP25.12■■□□□ 1.61
CLN5-215ENST00000636767 TJP1Q07157 1748 aa25.12■■□□□ 1.61
CLN5-215ENST00000636767 NWD2Q9ULI1 1742 aa25.12■■□□□ 1.61
CLN5-215ENST00000636767 IFIT1P09914 478 aaKnown RBP25.11■■□□□ 1.61
CLN5-215ENST00000636767 IL15P40933 162 aaPredicted RBP25.11■■□□□ 1.61
CLN5-215ENST00000636767 ZNF397Q8NF99 534 aaPredicted RBP25.11■■□□□ 1.61
CLN5-215ENST00000636767 DCAF5Q96JK2 942 aa25.11■■□□□ 1.61
CLN5-215ENST00000636767 MORC2Q9Y6X9 1032 aaPredicted RBP25.11■■□□□ 1.61
CLN5-215ENST00000636767 IGSF3O75054 1194 aa25.11■■□□□ 1.61
CLN5-215ENST00000636767 KMT5BQ4FZB7 885 aa25.11■■□□□ 1.61
CLN5-215ENST00000636767 ERO1AQ96HE7 468 aa25.11■■□□□ 1.61
CLN5-215ENST00000636767 BPIFA3Q9BQP9 254 aa25.11■■□□□ 1.61
CLN5-215ENST00000636767 CYP27B1O15528 508 aa25.1■■□□□ 1.61
CLN5-215ENST00000636767 STK38Q15208 465 aa25.1■■□□□ 1.61
CLN5-215ENST00000636767 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
CLN5-215ENST00000636767 LRRC24Q50LG9 513 aa25.1■■□□□ 1.61
CLN5-215ENST00000636767 KCNG4Q8TDN1 519 aa25.1■■□□□ 1.61
CLN5-215ENST00000636767 ALS2Q96Q42 1657 aa25.09■■□□□ 1.61
CLN5-215ENST00000636767 OSBP2Q969R2 916 aa25.09■■□□□ 1.61
CLN5-215ENST00000636767 XPO4Q9C0E2 1151 aaKnown RBP25.09■■□□□ 1.61
CLN5-215ENST00000636767 POLR3EQ9NVU0 708 aa25.09■■□□□ 1.61
CLN5-215ENST00000636767 MST1RQ04912 1400 aa25.09■■□□□ 1.61
CLN5-215ENST00000636767 YEATS4O95619 227 aa25.09■■□□□ 1.61
CLN5-215ENST00000636767 SF3A1Q15459 793 aaKnown RBP25.09■■□□□ 1.61
CLN5-215ENST00000636767 E4F1Q66K89 784 aaPredicted RBP25.09■■□□□ 1.61
CLN5-215ENST00000636767 C8orf76Q96K31 380 aa25.09■■□□□ 1.61
CLN5-215ENST00000636767 ZNF142P52746 1687 aaPredicted RBP25.08■■□□□ 1.61
CLN5-215ENST00000636767 NUP188Q5SRE5 1749 aa25.08■■□□□ 1.61
CLN5-215ENST00000636767 A0A1B0GUL7 405 aa25.08■■□□□ 1.61
CLN5-215ENST00000636767 POLR3DP05423 398 aaPredicted RBP25.08■■□□□ 1.61
CLN5-215ENST00000636767 ELF2Q15723 593 aa25.08■■□□□ 1.61
CLN5-215ENST00000636767 KIF2AO00139 706 aaPredicted RBP25.08■■□□□ 1.6
CLN5-215ENST00000636767 EYA2O00167 538 aa25.08■■□□□ 1.6
CLN5-215ENST00000636767 FOXP2O15409 715 aa25.08■■□□□ 1.6
CLN5-215ENST00000636767 ARMCX5Q6P1M9 558 aa25.08■■□□□ 1.6
CLN5-215ENST00000636767 ZNF594Q96JF6 807 aaPredicted RBP25.08■■□□□ 1.6
CLN5-215ENST00000636767 IFNKQ9P0W0 207 aa25.08■■□□□ 1.6
CLN5-215ENST00000636767 NBPF26B4DH59 902 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 SPTLC2O15270 562 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 SMC2O95347 1197 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 SLU7O95391 586 aaKnown RBP25.07■■□□□ 1.6
CLN5-215ENST00000636767 GABPB1Q06547 395 aaPredicted RBP25.07■■□□□ 1.6
CLN5-215ENST00000636767 NBPF14Q5TI25 921 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 NBPF10Q6P3W6 841 aaKnown RBP25.07■■□□□ 1.6
CLN5-215ENST00000636767 NBPF15Q8N660 670 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 CCDC150Q8NCX0 1101 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 CWC25Q9NXE8 425 aaPredicted RBP25.07■■□□□ 1.6
CLN5-215ENST00000636767 ADAMTSL3P82987 1691 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 DDX60Q8IY21 1712 aaKnown RBP25.07■■□□□ 1.6
CLN5-215ENST00000636767 ZRSR1Q15695 479 aaKnown RBP25.07■■□□□ 1.6
CLN5-215ENST00000636767 MYSM1Q5VVJ2 828 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 TMC6Q7Z403 805 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 FBXO18Q8NFZ0 1043 aa25.07■■□□□ 1.6
CLN5-215ENST00000636767 HAND2P61296 217 aa25.06■■□□□ 1.6
CLN5-215ENST00000636767 FBXO38Q6PIJ6 1188 aa25.06■■□□□ 1.6
CLN5-215ENST00000636767 HPS5Q9UPZ3 1129 aa25.06■■□□□ 1.6
CLN5-215ENST00000636767 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
CLN5-215ENST00000636767 PPP1R13BQ96KQ4 1090 aa25.05■■□□□ 1.6
CLN5-215ENST00000636767 COL18A1P39060 1754 aa25.05■■□□□ 1.6
CLN5-215ENST00000636767 BIN1O00499 593 aa25.05■■□□□ 1.6
CLN5-215ENST00000636767 SLC3A2P08195 630 aaKnown RBP25.05■■□□□ 1.6
CLN5-215ENST00000636767 TTLL7Q6ZT98 887 aa25.05■■□□□ 1.6
CLN5-215ENST00000636767 BRAPQ7Z569 592 aa25.05■■□□□ 1.6
CLN5-215ENST00000636767 ORC3Q9UBD5 711 aaPredicted RBP25.05■■□□□ 1.6
CLN5-215ENST00000636767 KLF18A0A0U1RQI7 1052 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 GOLGA8BA8MQT2 603 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 CABP4P57796 275 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 NLRP12P59046 1061 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 NCAPHQ15003 741 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.04■■□□□ 1.6
CLN5-215ENST00000636767 GJB4Q9NTQ9 266 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 KIF28PB7ZC32 967 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 PRC1O43663 620 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 ZNF202O95125 648 aa25.04■■□□□ 1.6
CLN5-215ENST00000636767 MB21D2Q8IYB1 491 aaPredicted RBP25.04■■□□□ 1.6
CLN5-215ENST00000636767 PUS3Q9BZE2 481 aaKnown RBP25.04■■□□□ 1.6
CLN5-215ENST00000636767 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
CLN5-215ENST00000636767 PSDA5PKW4 1024 aaPredicted RBP25.03■■□□□ 1.6
CLN5-215ENST00000636767 CIAO1O76071 339 aa25.03■■□□□ 1.6
CLN5-215ENST00000636767 SFPQP23246 707 aaKnown RBP eCLIP25.03■■□□□ 1.6
CLN5-215ENST00000636767 IMMTQ16891 758 aaKnown RBP25.03■■□□□ 1.6
CLN5-215ENST00000636767 AXDND1Q5T1B0 1012 aaPredicted RBP25.03■■□□□ 1.6
CLN5-215ENST00000636767 KRT222Q8N1A0 295 aa25.03■■□□□ 1.6
CLN5-215ENST00000636767 L2HGDHQ9H9P8 463 aa25.03■■□□□ 1.6
CLN5-215ENST00000636767 C1orf167Q5SNV9 1468 aa25.03■■□□□ 1.6
CLN5-215ENST00000636767 MROH7-TTC4A0A0A0MT08 1334 aa25.02■■□□□ 1.6
CLN5-215ENST00000636767 DHX16O60231 1041 aaKnown RBP25.02■■□□□ 1.6
CLN5-215ENST00000636767 CSB-PGBD3P0DP91 1061 aa25.02■■□□□ 1.6
CLN5-215ENST00000636767 KCNJ6P48051 423 aa25.02■■□□□ 1.6
CLN5-215ENST00000636767 ANTXR2P58335 489 aa25.02■■□□□ 1.6
CLN5-215ENST00000636767 FKBP4Q02790 459 aaKnown RBP eCLIP25.02■■□□□ 1.6
CLN5-215ENST00000636767 RAB11FIP4Q86YS3 637 aa25.02■■□□□ 1.6
CLN5-215ENST00000636767 FAM53CQ9NYF3 392 aa25.02■■□□□ 1.6
CLN5-215ENST00000636767 PFKFB1P16118 471 aa25.02■■□□□ 1.6
CLN5-215ENST00000636767 C4AP0C0L4 1744 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms