RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FAM160A1Q05DH4 1040 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 LRRC8AQ8IWT6 810 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 DHX40Q8IX18 779 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 JCADQ9P266 1359 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 RALYLQ86SE5 291 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 DSCC1Q9BVC3 393 aa16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 FOXP2O15409 715 aa16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 SPECC1Q5M775 1068 aa16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 NAA16Q6N069 864 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 LMOD1P29536 600 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 IMMTQ16891 758 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 MTERF4Q7Z6M4 381 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 CCDC112Q8NEF3 446 aa16.37■□□□□ 0.21
CACNA1A-228ENST00000636610 PALLDQ8WX93 1383 aa16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 GOLGA8FQ08AF8 430 aa16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 GOLGA8DPQ0D2H9 430 aa16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 MRPS27Q92552 414 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 ATP2B1P20020 1258 aa16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 HSPA2P54652 639 aa16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 NCBP1Q09161 790 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 SYNE3Q6ZMZ3 975 aa16.36■□□□□ 0.21
CACNA1A-228ENST00000636610 GPAA1O43292 621 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 CEP135Q66GS9 1140 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 CEP57L1Q8IYX8 460 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 ENGASEQ8NFI3 743 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 LLPHQ9BRT6 129 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 TMEM94Q12767 1356 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 IFNKQ9P0W0 207 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 ANTXR2P58335 489 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 SLC9C2Q5TAH2 1124 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 TMC6Q7Z403 805 aa16.35■□□□□ 0.21
CACNA1A-228ENST00000636610 ZNF213O14771 459 aa16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 PDIA4P13667 645 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 B4E1Z4 1266 aa16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 SPTLC2O15270 562 aa16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 CLIC6Q96NY7 704 aa16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 XPO4Q9C0E2 1151 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 CNNM1Q9NRU3 951 aa16.34■□□□□ 0.21
CACNA1A-228ENST00000636610 ATP1A3P13637 1013 aa16.33■□□□□ 0.21
CACNA1A-228ENST00000636610 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.21
CACNA1A-228ENST00000636610 RRP12Q5JTH9 1297 aaKnown RBP16.33■□□□□ 0.21
CACNA1A-228ENST00000636610 FMR1NBQ8N0W7 255 aaPredicted RBP16.33■□□□□ 0.21
CACNA1A-228ENST00000636610 LINC00301Q8NCQ3 95 aa16.33■□□□□ 0.21
CACNA1A-228ENST00000636610 TMX1Q9H3N1 280 aa16.33■□□□□ 0.21
CACNA1A-228ENST00000636610 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.21
CACNA1A-228ENST00000636610 PTPN14Q15678 1187 aa16.33■□□□□ 0.2
CACNA1A-228ENST00000636610 HLFQ16534 295 aa16.33■□□□□ 0.2
CACNA1A-228ENST00000636610 CCDC191Q8NCU4 936 aa16.33■□□□□ 0.2
CACNA1A-228ENST00000636610 ZBTB9Q96C00 473 aa16.33■□□□□ 0.2
CACNA1A-228ENST00000636610 ZKSCAN3Q9BRR0 538 aa16.33■□□□□ 0.2
CACNA1A-228ENST00000636610 GREM2Q9H772 168 aa16.33■□□□□ 0.2
CACNA1A-228ENST00000636610 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
CACNA1A-228ENST00000636610 MCAMP43121 646 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 EVA1CP58658 441 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 ZNF202O95125 648 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 MYSM1Q5VVJ2 828 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 FAM177A1Q8N128 213 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 SALL1Q9NSC2 1324 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 WDHD1O75717 1129 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 FBXO18Q8NFZ0 1043 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 SLIT3O75094 1523 aa16.32■□□□□ 0.2
CACNA1A-228ENST00000636610 CYB5R4Q7L1T6 521 aa16.31■□□□□ 0.2
CACNA1A-228ENST00000636610 NCOA7Q8NI08 942 aa16.31■□□□□ 0.2
CACNA1A-228ENST00000636610 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-228ENST00000636610 TBC1D10CQ8IV04 446 aa16.31■□□□□ 0.2
CACNA1A-228ENST00000636610 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
CACNA1A-228ENST00000636610 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-228ENST00000636610 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
CACNA1A-228ENST00000636610 CTAGE5O15320 804 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 ITGA6P23229 1130 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 TRDNQ13061 729 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 ADALQ6DHV7 355 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 PFKFB1P16118 471 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 PNOCQ13519 176 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 AGXT2Q9BYV1 514 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 MROH7-TTC4A0A0A0MT08 1334 aa16.3■□□□□ 0.2
CACNA1A-228ENST00000636610 CCZ1BP86790 482 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 CCZ1P86791 482 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms