RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 ELP1O95163 1332 aa7.41□□□□□ -1.22
GABRA1-213ENST00000636340 PIK3CDO00329 1044 aa7.4□□□□□ -1.22
GABRA1-213ENST00000636340 SLC27A2O14975 620 aa7.4□□□□□ -1.22
GABRA1-213ENST00000636340 IFIT2P09913 472 aaKnown RBP7.4□□□□□ -1.22
GABRA1-213ENST00000636340 HMGN5P82970 282 aaKnown RBP7.4□□□□□ -1.22
GABRA1-213ENST00000636340 NMIQ13287 307 aaPredicted RBP7.4□□□□□ -1.22
GABRA1-213ENST00000636340 CWF19L2Q2TBE0 894 aaKnown RBP7.4□□□□□ -1.22
GABRA1-213ENST00000636340 TTC6Q86TZ1 520 aa7.4□□□□□ -1.22
GABRA1-213ENST00000636340 C17orf53Q8N3J3 647 aaPredicted RBP7.4□□□□□ -1.22
GABRA1-213ENST00000636340 EAF2Q96CJ1 260 aaPredicted RBP7.4□□□□□ -1.22
GABRA1-213ENST00000636340 MED23Q9ULK4 1368 aa7.4□□□□□ -1.22
GABRA1-213ENST00000636340 MRC1P22897 1456 aa7.4□□□□□ -1.22
GABRA1-213ENST00000636340 MST1RQ04912 1400 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 TEFQ10587 303 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 ZNF530Q6P9A1 599 aaPredicted RBP7.4□□□□□ -1.23
GABRA1-213ENST00000636340 MPRIPQ6WCQ1 1025 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 AACSQ86V21 672 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 KIAA1524Q8TCG1 905 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 DDX54Q8TDD1 881 aaKnown RBP7.4□□□□□ -1.23
GABRA1-213ENST00000636340 LRRC59Q96AG4 307 aaKnown RBP7.4□□□□□ -1.23
GABRA1-213ENST00000636340 GPATCH3Q96I76 525 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 SUCLG2Q96I99 432 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 SLAIN2Q9P270 581 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 TAF6LQ9Y6J9 622 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 SIPA1L3O60292 1781 aaPredicted RBP7.4□□□□□ -1.23
GABRA1-213ENST00000636340 C1orf167Q5SNV9 1468 aa7.4□□□□□ -1.23
GABRA1-213ENST00000636340 ADAMTS7Q9UKP4 1686 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 A0A0D9SFI3 127 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 PRAMEF22A3QJZ6 481 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 GRM8O00222 908 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 HIP1O00291 1037 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 ZKSCAN1P17029 563 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 LIG1P18858 919 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 TOB2Q14106 344 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 TSGA10IPQ3SY00 556 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 PLEKHO1Q53GL0 409 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 CDC37L1Q7L3B6 337 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 SAMD7Q7Z3H4 446 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 LINS1Q8NG48 757 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 JARID2Q92833 1246 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 TLR7Q9NYK1 1049 aaKnown RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 C9orf78Q9NZ63 289 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 VPS37CA5D8V6 355 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 CCDC192P0DO97 292 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 RPS6KB1P23443 525 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 AMOTQ4VCS5 1084 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 DMRTA1Q5VZB9 504 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 LARP1BQ659C4 914 aaKnown RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 RBM43Q6ZSC3 357 aaKnown RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 HELBQ8NG08 1087 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 PKNOX2Q96KN3 472 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 BICC1Q9H694 974 aaKnown RBP7.39□□□□□ -1.23
GABRA1-213ENST00000636340 PYCARDQ9ULZ3 195 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 HDAC5Q9UQL6 1122 aa7.39□□□□□ -1.23
GABRA1-213ENST00000636340 CAMTA1Q9Y6Y1 1673 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 CFHP08603 1231 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 PSMA5P28066 241 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 KRT85P78386 507 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 FAM173BQ6P4H8 233 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 BRINP3Q76B58 766 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 CCDC8Q9H0W5 538 aaPredicted RBP7.38□□□□□ -1.23
GABRA1-213ENST00000636340 MRVI1Q9Y6F6 885 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 ROBO1Q9Y6N7 1651 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 COL15A1P39059 1388 aa7.38□□□□□ -1.23
GABRA1-213ENST00000636340 TMEM88BA6NKF7 163 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 SOCS7O14512 581 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 IGKV5-2P06315 115 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 TPM3P06753 285 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 USPL1Q5W0Q7 1092 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 KCNH5Q8NCM2 988 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 FAM200AQ8TCP9 573 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 PRM3Q9NNZ6 103 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 DDX21Q9NR30 783 aaKnown RBP eCLIP7.37□□□□□ -1.23
GABRA1-213ENST00000636340 IVNS1ABPQ9Y6Y0 642 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 SLIT3O75094 1523 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 TAF5LO75529 589 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 PDCP20941 246 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 TYRO3Q06418 890 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 G3BP1Q13283 466 aaKnown RBP eCLIP7.37□□□□□ -1.23
GABRA1-213ENST00000636340 ANKRD1Q15327 319 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 MAP3K11Q16584 847 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 DNTTIP2Q5QJE6 756 aaKnown RBP7.37□□□□□ -1.23
GABRA1-213ENST00000636340 LARP1Q6PKG0 1096 aaKnown RBP7.37□□□□□ -1.23
GABRA1-213ENST00000636340 BLOC1S2Q6QNY1 142 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 ZNF589Q86UQ0 364 aaPredicted RBP7.37□□□□□ -1.23
GABRA1-213ENST00000636340 FERMT3Q86UX7 667 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 ARHGEF25Q86VW2 580 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 TCEANC2Q96MN5 208 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 NUP62CLQ9H1M0 184 aa7.37□□□□□ -1.23
GABRA1-213ENST00000636340 MAFBQ9Y5Q3 323 aaPredicted RBP7.37□□□□□ -1.23
GABRA1-213ENST00000636340 SCNN1AP37088 669 aa7.36□□□□□ -1.23
GABRA1-213ENST00000636340 LEO1Q8WVC0 666 aaPredicted RBP7.36□□□□□ -1.23
GABRA1-213ENST00000636340 CCDC94Q9BW85 323 aaPredicted RBP7.36□□□□□ -1.23
GABRA1-213ENST00000636340 SCAND2PQ9GZW5 306 aaPredicted RBP7.36□□□□□ -1.23
GABRA1-213ENST00000636340 BOLA2Q9H3K6 86 aa7.36□□□□□ -1.23
GABRA1-213ENST00000636340 CBX8Q9HC52 389 aa7.36□□□□□ -1.23
GABRA1-213ENST00000636340 HMG20BQ9P0W2 317 aa7.36□□□□□ -1.23
GABRA1-213ENST00000636340 PRDM4Q9UKN5 801 aa7.36□□□□□ -1.23
GABRA1-213ENST00000636340 KCNJ4P48050 445 aa7.36□□□□□ -1.23
GABRA1-213ENST00000636340 RFX5P48382 616 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms