RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	HOMEZ	Q8IX15	550 aa		12.49	□□□□□ -0.41
CHD2-223	ENST00000636306	XAGE3	Q8WTP9	111 aa		12.49	□□□□□ -0.41
CHD2-223	ENST00000636306	RILPL2	Q969X0	211 aa		12.49	□□□□□ -0.41
CHD2-223	ENST00000636306	ADAM21	Q9UKJ8	722 aa		12.49	□□□□□ -0.41
CHD2-223	ENST00000636306	PHLPP2	Q6ZVD8	1323 aa		12.49	□□□□□ -0.41
CHD2-223	ENST00000636306	TNS2	Q63HR2	1409 aa		12.49	□□□□□ -0.41
CHD2-223	ENST00000636306	EFCAB8	A8MWE9	144 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	FIBP	O43427	364 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	LMAN1	P49257	510 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	JAKMIP3	Q5VZ66	844 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	ROBO1	Q9Y6N7	1651 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306		A0A087WUV0	522 aa	Predicted RBP	12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	CCDC69	A6NI79	296 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	NEURL1B	A8MQ27	555 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	IFIT2	P09913	472 aa	Known RBP	12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	MYL6B	P14649	208 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	CHML	P26374	656 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	ANKRD13D	Q6ZTN6	518 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	RUFY2	Q8WXA3	655 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	IL1RAPL2	Q9NP60	686 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	IMPACT	Q9P2X3	320 aa		12.48	□□□□□ -0.41
CHD2-223	ENST00000636306	TOGARAM1	Q9Y4F4	1720 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	PRAMEF22	A3QJZ6	481 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	HIP1	O00291	1037 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	PPP1R12A	O14974	1030 aa	Predicted RBP	12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	TADA3	O75528	432 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	SYT1	P21579	422 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	GCKR	Q14397	625 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	SART3	Q15020	963 aa	Known RBP	12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	CWF19L2	Q2TBE0	894 aa	Known RBP	12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	EP400NL	Q6ZTU2	488 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	COPS6	Q7L5N1	327 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	PLBD2	Q8NHP8	589 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	TNMD	Q9H2S6	317 aa		12.47	□□□□□ -0.41
CHD2-223	ENST00000636306	CCDC189	A1A4V9	331 aa		12.46	□□□□□ -0.41
CHD2-223	ENST00000636306	GPR161	Q8N6U8	529 aa	Known RBP	12.46	□□□□□ -0.41
CHD2-223	ENST00000636306	SUCLG2	Q96I99	432 aa		12.46	□□□□□ -0.41
CHD2-223	ENST00000636306	MYD88	Q99836	296 aa		12.46	□□□□□ -0.41
CHD2-223	ENST00000636306	CLSTN2	Q9H4D0	955 aa		12.46	□□□□□ -0.41
CHD2-223	ENST00000636306	ECHDC1	Q9NTX5	307 aa		12.46	□□□□□ -0.41
CHD2-223	ENST00000636306	SGSM2	O43147	1006 aa		12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	ZNF165	P49910	485 aa		12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	EIF5	P55010	431 aa	Known RBP	12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	NUTM1	Q86Y26	1132 aa		12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	STAG1	Q8WVM7	1258 aa		12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	ARFGAP3	Q9NP61	516 aa		12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	SMC3	Q9UQE7	1217 aa		12.46	□□□□□ -0.42
CHD2-223	ENST00000636306	GOLGA6L19	H0YKK7	550 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	NPHP1	O15259	732 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	NRDC	O43847	1150 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	IGKV5-2	P06315	115 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	CCDC150	Q8NCX0	1101 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	PI4K2B	Q8TCG2	481 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	UTP14A	Q9BVJ6	771 aa	Known RBP	12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	BICC1	Q9H694	974 aa	Known RBP	12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	ANO2	Q9NQ90	1003 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	STRN4	Q9NRL3	753 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	DNAI1	Q9UI46	699 aa		12.45	□□□□□ -0.42
CHD2-223	ENST00000636306	SASH3	O75995	380 aa		12.44	□□□□□ -0.42
CHD2-223	ENST00000636306	MAP2K1	Q02750	393 aa	Predicted RBP	12.44	□□□□□ -0.42
CHD2-223	ENST00000636306	PPP1R13B	Q96KQ4	1090 aa		12.44	□□□□□ -0.42
CHD2-223	ENST00000636306	ZCCHC17	Q9NP64	241 aa	Known RBP	12.44	□□□□□ -0.42
CHD2-223	ENST00000636306	A1CF	Q9NQ94	594 aa	Known RBP	12.44	□□□□□ -0.42
CHD2-223	ENST00000636306	TRMT1	Q9NXH9	659 aa	Known RBP	12.44	□□□□□ -0.42
CHD2-223	ENST00000636306	TJP1	Q07157	1748 aa		12.44	□□□□□ -0.42
CHD2-223	ENST00000636306	KRT85	P78386	507 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	LRCH2	Q5VUJ6	765 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	TSHZ3	Q63HK5	1081 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	LRP10	Q7Z4F1	713 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	TADA2B	Q86TJ2	420 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	FUT8	Q9BYC5	575 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	TMOD3	Q9NYL9	352 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	MTMR6	Q9Y217	621 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	USP16	Q9Y5T5	823 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	COL16A1	Q07092	1604 aa	Predicted RBP	12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	ITGB4	P16144	1822 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	GOLIM4	O00461	696 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	MAP2K7	O14733	419 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	C21orf2	O43822	256 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	ETF1	P62495	437 aa	Known RBP	12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	DNM1	Q05193	864 aa	Known RBP	12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	BRD3	Q15059	726 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	AACS	Q86V21	672 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	TBC1D22A	Q8WUA7	517 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	EVI5L	Q96CN4	794 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	PALD1	Q9ULE6	856 aa		12.43	□□□□□ -0.42
CHD2-223	ENST00000636306	DISP2	A7MBM2	1401 aa		12.42	□□□□□ -0.42
CHD2-223	ENST00000636306	RFX7	Q2KHR2	1363 aa		12.42	□□□□□ -0.42
CHD2-223	ENST00000636306	SEC31A	O94979	1220 aa	Known RBP	12.42	□□□□□ -0.42
CHD2-223	ENST00000636306	IQCB1	Q15051	598 aa		12.42	□□□□□ -0.42
CHD2-223	ENST00000636306	E2F4	Q16254	413 aa		12.42	□□□□□ -0.42
CHD2-223	ENST00000636306	COPRS	Q9NQ92	184 aa		12.42	□□□□□ -0.42
CHD2-223	ENST00000636306	LIMCH1	Q9UPQ0	1083 aa		12.42	□□□□□ -0.42

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