RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 HDAC1Q13547 482 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 SAFB2Q14151 953 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 TRIP4Q15650 581 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 SNAP47Q5SQN1 464 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 SPATC1Q76KD6 591 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 ELP3Q9H9T3 547 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 ARNT2Q9HBZ2 717 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 CHST12Q9NRB3 414 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 SHROOM2Q13796 1616 aa9.67□□□□□ -0.86
SMARCA2-243ENST00000635590 PMLP29590 882 aa9.67□□□□□ -0.86
SMARCA2-243ENST00000635590 DHX8Q14562 1220 aaKnown RBP9.67□□□□□ -0.86
SMARCA2-243ENST00000635590 ARID5BQ14865 1188 aa9.67□□□□□ -0.86
SMARCA2-243ENST00000635590 ANKRD24Q8TF21 1146 aa9.67□□□□□ -0.86
SMARCA2-243ENST00000635590 CHRDQ9H2X0 955 aa9.67□□□□□ -0.86
SMARCA2-243ENST00000635590 KIF13AQ9H1H9 1805 aa9.67□□□□□ -0.86
SMARCA2-243ENST00000635590 EREGO14944 169 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 SNPHO15079 494 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 MYCLP1P12525 358 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 CAMK2GQ13555 558 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 LARP1BQ659C4 914 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 TNKS2Q9H2K2 1166 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 FNDC3AQ9Y2H6 1198 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 WASHC2CQ9Y4E1 1318 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 FHAD1B1AJZ9 1412 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 TGFBR3LH3BV60 316 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 SCGB1D2O95969 90 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 LIG3P49916 1009 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 FXNQ16595 210 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 SEZ6Q53EL9 994 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 CLEC4GQ6UXB4 293 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 SAMD3Q8N6K7 520 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 MFSD3Q96ES6 412 aa9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-243ENST00000635590 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 SHTN1A0MZ66 631 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 GJB6O95452 261 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 TXLNAP40222 546 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 GRM5P41594 1212 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 FCGRTP55899 365 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 NFKB2Q00653 900 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 PPP4R2Q9NY27 417 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 PPM1HQ9ULR3 514 aa9.65□□□□□ -0.86
SMARCA2-243ENST00000635590 KIF21BO75037 1637 aa9.65□□□□□ -0.87
SMARCA2-243ENST00000635590 PRG4Q92954 1404 aaPredicted RBP9.65□□□□□ -0.87
SMARCA2-243ENST00000635590 ABCC10Q5T3U5 1492 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 RGS20O76081 388 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 PDE6BP35913 854 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 LMNB2Q03252 620 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 MCL1Q07820 350 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 FOXD4Q12950 439 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 FAM196AQ6ZSG2 479 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 SV2BQ7L1I2 683 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 NIM1KQ8IY84 436 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 CAAP1Q9H8G2 361 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 MCM8Q9UJA3 840 aa9.64□□□□□ -0.87
SMARCA2-243ENST00000635590 A0A087X0B3 334 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 UBAP1LF5GYI3 381 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 MYL1P05976 194 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 IDH3AP50213 366 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 SSRP1Q08945 709 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 PPP1R26Q5T8A7 1209 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 PPP4R4Q6NUP7 873 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 C14orf80Q86SX3 495 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 C1orf127Q8N9H9 656 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 NINJ1Q92982 152 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 SFMBT1Q9UHJ3 866 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 ZMYM5Q9UJ78 669 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 A0A0U1RQG5 324 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 IRS4O14654 1257 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 AXDND1Q5T1B0 1012 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 KIAA0319Q5VV43 1072 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 FBXW10Q5XX13 1052 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 UBR7Q8N806 425 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 SCYL1Q96KG9 808 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 TRAK1Q9UPV9 953 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 KCNMB2Q9Y691 235 aa9.63□□□□□ -0.87
SMARCA2-243ENST00000635590 ATF3P18847 181 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 CENPCQ03188 943 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 BRD3Q15059 726 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 VPS72Q15906 364 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 CT47A1Q5JQC4 288 aaPredicted RBP9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 DIEXFQ68CQ4 756 aaKnown RBP9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 CDK15Q96Q40 435 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 FERD3LQ96RJ6 166 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 OXCT2Q9BYC2 517 aaPredicted RBP9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 EHD4Q9H223 541 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 AKAP2Q9Y2D5 859 aa9.62□□□□□ -0.87
SMARCA2-243ENST00000635590 IFRD1O00458 451 aaPredicted RBP9.61□□□□□ -0.87
SMARCA2-243ENST00000635590 CELA3AP09093 270 aa9.61□□□□□ -0.87
SMARCA2-243ENST00000635590 SETQ01105 290 aaPredicted RBP9.61□□□□□ -0.87
SMARCA2-243ENST00000635590 CCDC116Q8IYX3 515 aa9.61□□□□□ -0.87
SMARCA2-243ENST00000635590 CMTR1Q8N1G2 835 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-243ENST00000635590 TMTC2Q8N394 836 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms