RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SNRKQ9NRH2 765 aa17.59■□□□□ 0.41
LINC00339-208ENST00000634934 AOX1Q06278 1338 aa17.59■□□□□ 0.41
LINC00339-208ENST00000634934 ECE2O60344 883 aa17.58■□□□□ 0.41
LINC00339-208ENST00000634934 MCAMP43121 646 aa17.58■□□□□ 0.41
LINC00339-208ENST00000634934 RASGRF1Q13972 1273 aa17.58■□□□□ 0.41
LINC00339-208ENST00000634934 SCARF1Q14162 830 aa17.58■□□□□ 0.41
LINC00339-208ENST00000634934 NIM1KQ8IY84 436 aa17.58■□□□□ 0.41
LINC00339-208ENST00000634934 ZNF512BQ96KM6 892 aaPredicted RBP17.58■□□□□ 0.41
LINC00339-208ENST00000634934 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.41
LINC00339-208ENST00000634934 IL1R1P14778 569 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 CHAF1AQ13111 956 aaPredicted RBP17.57■□□□□ 0.4
LINC00339-208ENST00000634934 PI16Q6UXB8 463 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
LINC00339-208ENST00000634934 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
LINC00339-208ENST00000634934 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 JAG2Q9Y219 1238 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 NDUFB9Q9Y6M9 179 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 SEMA3EO15041 775 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 MAP4K4O95819 1239 aaPredicted RBP17.57■□□□□ 0.4
LINC00339-208ENST00000634934 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
LINC00339-208ENST00000634934 FBXW7Q969H0 707 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 DENND2AQ9ULE3 1009 aa17.57■□□□□ 0.4
LINC00339-208ENST00000634934 ZAP70P43403 619 aa17.56■□□□□ 0.4
LINC00339-208ENST00000634934 TTC22Q5TAA0 569 aa17.56■□□□□ 0.4
LINC00339-208ENST00000634934 PODNQ7Z5L7 613 aa17.56■□□□□ 0.4
LINC00339-208ENST00000634934 HAUS7Q99871 368 aa17.56■□□□□ 0.4
LINC00339-208ENST00000634934 TRIM6-TRIM34B2RNG4 842 aa17.54■□□□□ 0.4
LINC00339-208ENST00000634934 GOLIM4O00461 696 aa17.54■□□□□ 0.4
LINC00339-208ENST00000634934 GTF2IP78347 998 aa17.54■□□□□ 0.4
LINC00339-208ENST00000634934 EDC3Q96F86 508 aaKnown RBP17.54■□□□□ 0.4
LINC00339-208ENST00000634934 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
LINC00339-208ENST00000634934 KCNQ5Q9NR82 932 aa17.54■□□□□ 0.4
LINC00339-208ENST00000634934 ZNRF3Q9ULT6 936 aa17.54■□□□□ 0.4
LINC00339-208ENST00000634934 COL1A1P02452 1464 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-208ENST00000634934 YDJCA8MPS7 323 aa17.53■□□□□ 0.4
LINC00339-208ENST00000634934 GSPT1P15170 499 aaKnown RBP17.53■□□□□ 0.4
LINC00339-208ENST00000634934 RILPL2Q969X0 211 aa17.53■□□□□ 0.4
LINC00339-208ENST00000634934 PAG1Q9NWQ8 432 aa17.53■□□□□ 0.4
LINC00339-208ENST00000634934 ZNF541Q9H0D2 1346 aa17.53■□□□□ 0.4
LINC00339-208ENST00000634934 TTLL5Q6EMB2 1281 aa17.52■□□□□ 0.4
LINC00339-208ENST00000634934 TBC1D9Q6ZT07 1266 aa17.52■□□□□ 0.4
LINC00339-208ENST00000634934 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.4
LINC00339-208ENST00000634934 RAD17O75943 681 aa17.52■□□□□ 0.39
LINC00339-208ENST00000634934 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.39
LINC00339-208ENST00000634934 WDR66Q8TBY9 1149 aa17.52■□□□□ 0.39
LINC00339-208ENST00000634934 ABCF2Q9UG63 623 aa17.52■□□□□ 0.39
LINC00339-208ENST00000634934 PDS5AQ29RF7 1337 aaKnown RBP17.51■□□□□ 0.39
LINC00339-208ENST00000634934 USP17L3A6NCW0 530 aa17.51■□□□□ 0.39
LINC00339-208ENST00000634934 USP17L4A6NCW7 530 aa17.51■□□□□ 0.39
LINC00339-208ENST00000634934 ZBTB22O15209 634 aa17.51■□□□□ 0.39
LINC00339-208ENST00000634934 USP17L1Q7RTZ2 530 aa17.51■□□□□ 0.39
LINC00339-208ENST00000634934 CNTROBQ8N137 903 aa17.51■□□□□ 0.39
LINC00339-208ENST00000634934 PIH1D3Q9NQM4 214 aaKnown RBP17.51■□□□□ 0.39
LINC00339-208ENST00000634934 FAM205AQ6ZU69 1335 aa17.51■□□□□ 0.39
LINC00339-208ENST00000634934 ZC3H4Q9UPT8 1303 aaKnown RBP17.51■□□□□ 0.39
LINC00339-208ENST00000634934 FZD9O00144 591 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 SDSP20132 328 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 EIF6P56537 245 aaKnown RBP17.5■□□□□ 0.39
LINC00339-208ENST00000634934 TTF1Q15361 905 aaPredicted RBP17.5■□□□□ 0.39
LINC00339-208ENST00000634934 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 STRIP1Q5VSL9 837 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 TBC1D22AQ8WUA7 517 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 LRP2BPQ9P2M1 347 aa17.5■□□□□ 0.39
LINC00339-208ENST00000634934 GLTPD2A6NH11 291 aa17.49■□□□□ 0.39
LINC00339-208ENST00000634934 IDH1O75874 414 aaKnown RBP17.49■□□□□ 0.39
LINC00339-208ENST00000634934 DDNO94850 711 aaPredicted RBP17.49■□□□□ 0.39
LINC00339-208ENST00000634934 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
LINC00339-208ENST00000634934 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
LINC00339-208ENST00000634934 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
LINC00339-208ENST00000634934 GPBP1L1Q9HC44 474 aaPredicted RBP17.49■□□□□ 0.39
LINC00339-208ENST00000634934 NMRK2Q9NPI5 230 aa17.49■□□□□ 0.39
LINC00339-208ENST00000634934 PSMD14O00487 310 aa17.48■□□□□ 0.39
LINC00339-208ENST00000634934 CXCL9Q07325 125 aa17.48■□□□□ 0.39
LINC00339-208ENST00000634934 DACT2Q5SW24 774 aa17.48■□□□□ 0.39
LINC00339-208ENST00000634934 CIAPIN1Q6FI81 312 aa17.48■□□□□ 0.39
LINC00339-208ENST00000634934 RAI14Q9P0K7 980 aa17.48■□□□□ 0.39
LINC00339-208ENST00000634934 AKAP11Q9UKA4 1901 aa17.48■□□□□ 0.39
LINC00339-208ENST00000634934 SCN9AQ15858 1988 aa17.48■□□□□ 0.39
LINC00339-208ENST00000634934 SALL1Q9NSC2 1324 aa17.47■□□□□ 0.39
LINC00339-208ENST00000634934 TNIP1Q15025 636 aa17.47■□□□□ 0.39
LINC00339-208ENST00000634934 SPTY2D1Q68D10 685 aaPredicted RBP17.47■□□□□ 0.39
LINC00339-208ENST00000634934 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
LINC00339-208ENST00000634934 MYH13Q9UKX3 1938 aa17.47■□□□□ 0.39
LINC00339-208ENST00000634934 LDHBP07195 334 aaKnown RBP17.47■□□□□ 0.39
LINC00339-208ENST00000634934 PRDX5P30044 214 aa17.47■□□□□ 0.39
LINC00339-208ENST00000634934 CERS5Q8N5B7 392 aa17.47■□□□□ 0.39
LINC00339-208ENST00000634934 GJA3Q9Y6H8 435 aa17.47■□□□□ 0.39
LINC00339-208ENST00000634934 WDR90Q96KV7 1748 aa17.46■□□□□ 0.39
LINC00339-208ENST00000634934 F8W031 263 aaPredicted RBP17.46■□□□□ 0.39
LINC00339-208ENST00000634934 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
LINC00339-208ENST00000634934 MAP3K12Q12852 859 aa17.46■□□□□ 0.39
LINC00339-208ENST00000634934 GRIK5Q16478 980 aa17.46■□□□□ 0.39
LINC00339-208ENST00000634934 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
LINC00339-208ENST00000634934 RSBN1LQ6PCB5 846 aaPredicted RBP17.46■□□□□ 0.39
LINC00339-208ENST00000634934 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC00339-208ENST00000634934 RRAGCQ9HB90 399 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms