RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 ITGA6P23229 1130 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 RASSF7Q02833 373 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 TPTE2Q6XPS3 522 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 CKAP2LQ8IYA6 745 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 GPR161Q8N6U8 529 aaKnown RBP7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 SLC30A3Q99726 388 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 LNPKQ9C0E8 428 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 SUPT16HQ9Y5B9 1047 aaKnown RBP7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 CEP164Q9UPV0 1460 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 A0A096LPE4 126 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 A0A1W2PPZ6 126 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 SMARCA5O60264 1052 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 SSBP05455 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 HSP90B1P14625 803 aaKnown RBP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 LMNB1P20700 586 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 LIG3P49916 1009 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 RPS26P62854 115 aaKnown RBP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 PPP2R3AQ06190 1150 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 NBPF6Q5VWK0 638 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 NXPE3Q969Y0 559 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 ZNF837Q96EG3 531 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 NBPF4Q96M43 638 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 CNTNAP3BQ96NU0 1288 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 NSUN5Q96P11 429 aaKnown RBP7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 NT5C1AQ9BXI3 368 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 PBX4Q9BYU1 374 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 CNTNAP3Q9BZ76 1288 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 ADAMTS1Q9UHI8 967 aa7.47□□□□□ -1.21
TRAPPC9-216ENST00000634178 ROBO2Q9HCK4 1378 aa7.46□□□□□ -1.21
TRAPPC9-216ENST00000634178 FAM177BA6PVY3 158 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 GDF11O95390 407 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 LMNB2Q03252 620 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 TMEM151AQ8N4L1 468 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 PHC3Q8NDX5 983 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 PMFBP1Q8TBY8 1022 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 ASAP3Q8TDY4 903 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 GTPBP3Q969Y2 492 aaKnown RBP7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 KCNQ5Q9NR82 932 aa7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 TMA7Q9Y2S6 64 aaKnown RBP7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC9-216ENST00000634178 GRIA4P48058 902 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 MAP3K10Q02779 954 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 MAP3K11Q16584 847 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 SNAP47Q5SQN1 464 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 MICALL1Q8N3F8 863 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 NECAB3Q96P71 396 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 AVENQ9NQS1 362 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 SEC31BQ9NQW1 1179 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 TMEM39AQ9NV64 488 aa7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 GPN3Q9UHW5 284 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC9-216ENST00000634178 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 SIN3BO75182 1162 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 FBXO24O75426 580 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 NCLP19338 710 aaKnown RBP7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 NFE2L2Q16236 605 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 SPRED3Q2MJR0 410 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 TTBK2Q6IQ55 1244 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 RAB44Q7Z6P3 723 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 CCDC84Q86UT8 332 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 DDX54Q8TDD1 881 aaKnown RBP7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 BSNDQ8WZ55 320 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 RHOVQ96L33 236 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 ZNF576Q9H609 170 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 IGFLR1Q9H665 355 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 DNAJB12Q9NXW2 375 aaKnown RBP7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 ADAMTS8Q9UP79 889 aa7.44□□□□□ -1.22
TRAPPC9-216ENST00000634178 NFKBIEO00221 500 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 PF4P02776 101 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 ACPPP15309 386 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 CAMK2GQ13555 558 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 GRIN2CQ14957 1233 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 ZNF468Q5VIY5 522 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 ZNF385CQ66K41 422 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 SV2AQ7L0J3 742 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 CACTIN-AS1Q8N1I8 211 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 CPLX3Q8WVH0 158 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 TRIM56Q9BRZ2 755 aaKnown RBP7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 OSBPL2Q9H1P3 480 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 RASSF4Q9H2L5 321 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 CLEC4MQ9H2X3 399 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 ZSWIM4Q9H7M6 989 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 EFR3BQ9Y2G0 817 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 FANCD2Q9BXW9 1451 aa7.43□□□□□ -1.22
TRAPPC9-216ENST00000634178 ENC1O14682 589 aa7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 GREM1O60565 184 aa7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 CELA3AP09093 270 aa7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 PTPRAP18433 802 aa7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 EIF2AK2P19525 551 aaKnown RBP7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 SOX9P48436 509 aa7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 NASPP49321 788 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 MLLT1Q03111 559 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC9-216ENST00000634178 APOBRQ0VD83 1088 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms