RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 GNA11P29992 359 aa13.29□□□□□ -0.28
SHPRH-211ENST00000629427 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
SHPRH-211ENST00000629427 DCAF17Q5H9S7 520 aaPredicted RBP13.29□□□□□ -0.28
SHPRH-211ENST00000629427 LMBR1Q8WVP7 490 aa13.29□□□□□ -0.28
SHPRH-211ENST00000629427 DISP3Q9P2K9 1392 aa13.29□□□□□ -0.28
SHPRH-211ENST00000629427 GAS8O95995 478 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 KRT5P13647 590 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 MAP7D1Q3KQU3 841 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
SHPRH-211ENST00000629427 BICDL2A1A5D9 508 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 TACC1O75410 805 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 ESYT1Q9BSJ8 1104 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 BMS1Q14692 1282 aaKnown RBP13.28□□□□□ -0.28
SHPRH-211ENST00000629427 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 ZBTB16Q05516 673 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 USP48Q86UV5 1035 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 ZKSCAN3Q9BRR0 538 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 RTL1A6NKG5 1358 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 RXRAP19793 462 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 PDE1AP54750 535 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
SHPRH-211ENST00000629427 NSRP1Q9H0G5 558 aaKnown RBP13.28□□□□□ -0.28
SHPRH-211ENST00000629427 PARP1P09874 1014 aaKnown RBP13.27□□□□□ -0.28
SHPRH-211ENST00000629427 KIF5AQ12840 1032 aa13.27□□□□□ -0.28
SHPRH-211ENST00000629427 CCDC77Q9BR77 488 aa13.27□□□□□ -0.28
SHPRH-211ENST00000629427 FRMD4BQ9Y2L6 1034 aa13.27□□□□□ -0.28
SHPRH-211ENST00000629427 GNPATO15228 680 aa13.27□□□□□ -0.28
SHPRH-211ENST00000629427 HARSP12081 509 aaKnown RBP13.27□□□□□ -0.28
SHPRH-211ENST00000629427 CCDC6Q16204 474 aa13.27□□□□□ -0.28
SHPRH-211ENST00000629427 UVSSAQ2YD98 709 aa13.27□□□□□ -0.28
SHPRH-211ENST00000629427 TMOD4Q9NZQ9 345 aa13.27□□□□□ -0.28
SHPRH-211ENST00000629427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 APOBRQ0VD83 1088 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC14Q49A88 953 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC114Q96M63 670 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 ZNF830Q96NB3 372 aaPredicted RBP13.27□□□□□ -0.29
SHPRH-211ENST00000629427 NOD1Q9Y239 953 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 ZWINTO95229 277 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 CALCOCO1Q9P1Z2 691 aa13.27□□□□□ -0.29
SHPRH-211ENST00000629427 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
SHPRH-211ENST00000629427 SMIM23A6NLE4 172 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 DNM1Q05193 864 aaKnown RBP13.26□□□□□ -0.29
SHPRH-211ENST00000629427 SPAG1Q07617 926 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 FAM169AQ9Y6X4 670 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 SYT1P21579 422 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 TFCP2Q12800 502 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC25Q86WR0 208 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 SPTLC2O15270 562 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 TIGD1Q96MW7 591 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 ATP6V0A2Q9Y487 856 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 MCM6Q14566 821 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 AGTPBP1Q9UPW5 1226 aa13.26□□□□□ -0.29
SHPRH-211ENST00000629427 CTAGE15A4D2H0 777 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 CTAGE8P0CG41 777 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 STX17P56962 302 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 CTAGE6Q86UF2 777 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 CTAGE4Q8IX94 777 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 SELENOSQ9BQE4 189 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
SHPRH-211ENST00000629427 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
SHPRH-211ENST00000629427 DNAI1Q9UI46 699 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
SHPRH-211ENST00000629427 FNBP1Q96RU3 617 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 STMN4Q9H169 189 aaPredicted RBP13.25□□□□□ -0.29
SHPRH-211ENST00000629427 RALGAPBQ86X10 1494 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 KRT83P78385 493 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 PPP1R7Q15435 360 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 CWF19L2Q2TBE0 894 aaKnown RBP13.25□□□□□ -0.29
SHPRH-211ENST00000629427 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
SHPRH-211ENST00000629427 RAPGEF1Q13905 1077 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC65Q8IXS2 484 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 SMC1BQ8NDV3 1235 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 DACT1Q9NYF0 836 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 KRT86O43790 486 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 ARFGAP3Q9NP61 516 aa13.25□□□□□ -0.29
SHPRH-211ENST00000629427 SKILP12757 684 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 KRT9P35527 623 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 TBC1D32Q96NH3 1257 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 RNF34Q969K3 372 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 HAUS7Q99871 368 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
SHPRH-211ENST00000629427 ANKS4BQ8N8V4 417 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 SRRTQ9BXP5 876 aaKnown RBP13.24□□□□□ -0.29
SHPRH-211ENST00000629427 TEX11Q8IYF3 940 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
SHPRH-211ENST00000629427 ABCC1P33527 1531 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 UHRF1BP1LA0JNW5 1464 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC169A6NNP5 214 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms