RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 KCNH4Q9UQ05 1017 aa3.98□□□□□ -1.77
SCN8A-210ENST00000627665 AKAP2Q9Y2D5 859 aa3.98□□□□□ -1.77
SCN8A-210ENST00000627665 SUPT16HQ9Y5B9 1047 aaKnown RBP3.98□□□□□ -1.77
SCN8A-210ENST00000627665 HECW1Q76N89 1606 aa3.98□□□□□ -1.77
SCN8A-210ENST00000627665 SCAPERQ9BY12 1400 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 CPS1P31327 1500 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 PLEKHD1A6NEE1 506 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 TTLL8A6PVC2 850 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 K7ELQ4 463 aaPredicted RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 F11P03951 625 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 ATP4AP20648 1035 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 CTSOP43234 321 aaPredicted RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 TYRO3Q06418 890 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 HYAL2Q12891 473 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 BMS1Q14692 1282 aaKnown RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 TRIP4Q15650 581 aaPredicted RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 RNF187Q5TA31 235 aaPredicted RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 PRPF40BQ6NWY9 871 aaKnown RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 NCAPG2Q86XI2 1143 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 OXCT2Q9BYC2 517 aaPredicted RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 SLKQ9H2G2 1235 aaPredicted RBP3.97□□□□□ -1.77
SCN8A-210ENST00000627665 CRISPLD1Q9H336 500 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 LIN7BQ9HAP6 207 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 USP20Q9Y2K6 914 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 DYRK1BQ9Y463 629 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 ROBO2Q9HCK4 1378 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 PLA2R1Q13018 1463 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 CFAP74Q9C0B2 1584 aa3.97□□□□□ -1.77
SCN8A-210ENST00000627665 TMEM238LA0A1B0GVL6 79 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 A0A1W2PP55 124 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 FAM177BA6PVY3 158 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 MINDY4BA8MYZ0 360 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 PPP1R12AO14974 1030 aaPredicted RBP3.96□□□□□ -1.78
SCN8A-210ENST00000627665 RARAP10276 462 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 SMPD1P17405 629 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 HSD3B2P26439 372 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 KCNQ4P56696 695 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 PPP2R3AQ06190 1150 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 LAMC2Q13753 1193 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 PCSK7Q16549 785 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 TNNI3KQ59H18 835 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 SNAP47Q5SQN1 464 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 C6orf118Q5T5N4 469 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 ZNF746Q6NUN9 644 aaPredicted RBP3.96□□□□□ -1.78
SCN8A-210ENST00000627665 RNF217Q8TC41 542 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 EMID1Q96A84 441 aaPredicted RBP3.96□□□□□ -1.78
SCN8A-210ENST00000627665 CRBNQ96SW2 442 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 NT5C1AQ9BXI3 368 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 RBSNQ9H1K0 784 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 TOR4AQ9NXH8 423 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 EFR3BQ9Y2G0 817 aa3.96□□□□□ -1.78
SCN8A-210ENST00000627665 NPATQ14207 1427 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 CNTLNQ9NXG0 1405 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 C3P01024 1663 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 TCOF1Q13428 1488 aaKnown RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 SHANK2Q9UPX8 1470 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 H7C1W4 665 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 ATXN7O15265 892 aaPredicted RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 EIF4EBP3O60516 100 aaPredicted RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 SASH3O75995 380 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 NASPP49321 788 aaPredicted RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 PRR20EP86478 221 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 PRR20CP86479 221 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 PRR20DP86480 221 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 PRR20BP86481 221 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 PRR20AP86496 221 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 HNRNPUQ00839 825 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 PLAURQ03405 335 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 APOBRQ0VD83 1088 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 RPS26P11Q5JNZ5 115 aaPredicted RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 MRPL14Q6P1L8 145 aaKnown RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 LRP10Q7Z4F1 713 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 OR13H1Q8NG92 308 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 DDX54Q8TDD1 881 aaKnown RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 ZNF296Q8WUU4 475 aaPredicted RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 GAS2L1Q99501 681 aaPredicted RBP3.95□□□□□ -1.78
SCN8A-210ENST00000627665 CHRDQ9H2X0 955 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 GPAMQ9HCL2 828 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 COPRSQ9NQ92 184 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 CNTN3Q9P232 1028 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 PCDHGC4Q9Y5F7 938 aa3.95□□□□□ -1.78
SCN8A-210ENST00000627665 ZMYM3Q14202 1370 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 SBNO2Q9Y2G9 1366 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 TNFRSF10AO00220 468 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 GDF9O60383 454 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 MAP3K6O95382 1288 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 FAM157BP0CG42 384 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 RHOQP17081 205 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 SOX18P35713 384 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 SOX9P48436 509 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 VEGFBP49765 207 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 CHMP4BP1P59074 171 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 ANAPC15P60006 121 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 RPS26P62854 115 aaKnown RBP3.94□□□□□ -1.78
SCN8A-210ENST00000627665 IGBP1P78318 339 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.94□□□□□ -1.78
SCN8A-210ENST00000627665 ANKS3Q6ZW76 656 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 CCDC84Q86UT8 332 aaPredicted RBP3.94□□□□□ -1.78
SCN8A-210ENST00000627665 HPS1Q92902 700 aa3.94□□□□□ -1.78
SCN8A-210ENST00000627665 NKD1Q969G9 470 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms