RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CNNM3Q8NE01 707 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 NDC80O14777 642 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 FMNL1O95466 1100 aaPredicted RBP12.6□□□□□ -0.39
VPS8-227ENST00000625842 CCDC125Q86Z20 511 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 MLXIPQ9HAP2 919 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
VPS8-227ENST00000625842 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 COA7Q96BR5 231 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 CLIP2Q9UDT6 1046 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 XPOTO43592 962 aaKnown RBP12.6□□□□□ -0.39
VPS8-227ENST00000625842 PSMD1Q99460 953 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
VPS8-227ENST00000625842 ANO10Q9NW15 660 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 GINS2Q9Y248 185 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 SBNO1A3KN83 1393 aa12.6□□□□□ -0.39
VPS8-227ENST00000625842 WDR17Q8IZU2 1322 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 P4HA1P13674 534 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 CIAPIN1Q6FI81 312 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 SPAG5Q96R06 1193 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 ZFYVE9O95405 1425 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 EIF4A2Q14240 407 aaKnown RBP12.59□□□□□ -0.39
VPS8-227ENST00000625842 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 TAX1BP1Q86VP1 789 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 RAB3IL1Q8TBN0 382 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 ADPGKQ9BRR6 497 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 CARD10Q9BWT7 1032 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 IKBKGQ9Y6K9 419 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 STX10O60499 249 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 SP4Q02446 784 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 H0YCG3 227 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 MARCKSP29966 332 aaPredicted RBP12.59□□□□□ -0.39
VPS8-227ENST00000625842 ECE1P42892 770 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 GLG1Q92896 1179 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 RNF34Q969K3 372 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 TTF2Q9UNY4 1162 aaKnown RBP12.59□□□□□ -0.39
VPS8-227ENST00000625842 KCNH4Q9UQ05 1017 aa12.59□□□□□ -0.39
VPS8-227ENST00000625842 AFF2P51816 1311 aa12.58□□□□□ -0.39
VPS8-227ENST00000625842 NUP160Q12769 1436 aa12.58□□□□□ -0.39
VPS8-227ENST00000625842 PPP1R2P41236 205 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 PAFAH1B1P43034 410 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 TRPC3Q13507 836 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 GCOM1H8Y6P7 765 aaPredicted RBP12.58□□□□□ -0.4
VPS8-227ENST00000625842 MYZAPP0CAP1 466 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 ATF7P17544 494 aaPredicted RBP12.58□□□□□ -0.4
VPS8-227ENST00000625842 SPAG1Q07617 926 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 OTUD6AQ7L8S5 288 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 GSDMBQ8TAX9 411 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 LPIN2Q92539 896 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 SKIV2LQ15477 1246 aaKnown RBP12.58□□□□□ -0.4
VPS8-227ENST00000625842 MAGEB6Q8N7X4 407 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 SLC52A2Q9HAB3 445 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 JCADQ9P266 1359 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 FSD2A1L4K1 749 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 GOLGA6L9A6NEM1 432 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
VPS8-227ENST00000625842 STK25O00506 426 aa12.58□□□□□ -0.4
VPS8-227ENST00000625842 ITGA6P23229 1130 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 CFAP100Q494V2 611 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 NAA15Q9BXJ9 866 aaKnown RBP12.57□□□□□ -0.4
VPS8-227ENST00000625842 PAG1Q9NWQ8 432 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 LIMCH1Q9UPQ0 1083 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 YWHAEP62258 255 aaKnown RBP12.57□□□□□ -0.4
VPS8-227ENST00000625842 PPP2R5BQ15173 497 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■■■□□ 17.9
VPS8-227ENST00000625842 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
VPS8-227ENST00000625842 CPXCR1Q8N123 301 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 HMGB1P1B2RPK0 211 aaPredicted RBP12.57□□□□□ -0.4
VPS8-227ENST00000625842 MYCLP12524 364 aaPredicted RBP12.57□□□□□ -0.4
VPS8-227ENST00000625842 UBXN2AP68543 259 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 USP40Q9NVE5 1235 aa12.57□□□□□ -0.4
VPS8-227ENST00000625842 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
VPS8-227ENST00000625842 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
VPS8-227ENST00000625842 SIK1P57059 783 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 PDE4DQ08499 809 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
VPS8-227ENST00000625842 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS8-227ENST00000625842 MRPL11Q9Y3B7 192 aaKnown RBP12.56□□□□□ -0.4
VPS8-227ENST00000625842 TYW5A2RUC4 315 aaKnown RBP12.56□□□□□ -0.4
VPS8-227ENST00000625842 EYA2O00167 538 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 STAT6P42226 847 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 GTF2IP78347 998 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 MFSD14BQ5SR56 506 aa12.56□□□□□ -0.4
VPS8-227ENST00000625842 CCDC102BQ68D86 513 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms