RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 DCAF11Q8TEB1 546 aa7.11□□□□□ -1.27
CDKL5-207ENST00000624700 GIPC2Q8TF65 315 aa7.11□□□□□ -1.27
CDKL5-207ENST00000624700 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
CDKL5-207ENST00000624700 CHRDQ9H2X0 955 aa7.11□□□□□ -1.27
CDKL5-207ENST00000624700 ZFYVE1Q9HBF4 777 aa7.11□□□□□ -1.27
CDKL5-207ENST00000624700 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
CDKL5-207ENST00000624700 EREGO14944 169 aa7.1□□□□□ -1.27
CDKL5-207ENST00000624700 ZNF16P17020 682 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-207ENST00000624700 KIAA0319Q5VV43 1072 aa7.1□□□□□ -1.27
CDKL5-207ENST00000624700 GDF6Q6KF10 455 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-207ENST00000624700 MAP4K3Q8IVH8 894 aa7.1□□□□□ -1.27
CDKL5-207ENST00000624700 IL22RA1Q8N6P7 574 aa7.1□□□□□ -1.27
CDKL5-207ENST00000624700 TRAK1Q9UPV9 953 aa7.1□□□□□ -1.27
CDKL5-207ENST00000624700 F8W735 103 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-207ENST00000624700 ALX3O95076 343 aa7.09□□□□□ -1.27
CDKL5-207ENST00000624700 CEP120Q8N960 986 aa7.09□□□□□ -1.27
CDKL5-207ENST00000624700 FOXD4L4Q8WXT5 416 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-207ENST00000624700 NSUN5Q96P11 429 aaKnown RBP7.09□□□□□ -1.27
CDKL5-207ENST00000624700 SMNDC1O75940 238 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDKL5-207ENST00000624700 CYP2E1P05181 493 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-207ENST00000624700 FSTP19883 344 aa7.08□□□□□ -1.28
CDKL5-207ENST00000624700 GNA15P30679 374 aa7.08□□□□□ -1.28
CDKL5-207ENST00000624700 FAM177BA6PVY3 158 aa7.07□□□□□ -1.28
CDKL5-207ENST00000624700 GADD45BO75293 160 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-207ENST00000624700 XRCC5P13010 732 aaKnown RBP7.07□□□□□ -1.28
CDKL5-207ENST00000624700 SETDB1Q15047 1291 aa7.07□□□□□ -1.28
CDKL5-207ENST00000624700 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDKL5-207ENST00000624700 TMC4Q7Z404 712 aa7.07□□□□□ -1.28
CDKL5-207ENST00000624700 DUSP9Q99956 384 aaKnown RBP7.07□□□□□ -1.28
CDKL5-207ENST00000624700 MUC3BQ9H195 1237 aa7.07□□□□□ -1.28
CDKL5-207ENST00000624700 MRS2Q9HD23 443 aa7.07□□□□□ -1.28
CDKL5-207ENST00000624700 WWC3Q9ULE0 1092 aa7.07□□□□□ -1.28
CDKL5-207ENST00000624700 AK5Q9Y6K8 562 aa7.07□□□□□ -1.28
CDKL5-207ENST00000624700 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-207ENST00000624700 DAB2P98082 770 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 PSMD2Q13200 908 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 Q6ZS46 218 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 TMEM102Q8N9M5 508 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-207ENST00000624700 OSMRQ99650 979 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 PBX4Q9BYU1 374 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 EHD4Q9H223 541 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 PCMTD2Q9NV79 361 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 DZANK1Q9NVP4 752 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 KANSL3Q9P2N6 904 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 PARP2Q9UGN5 583 aa7.06□□□□□ -1.28
CDKL5-207ENST00000624700 A0A1W2PP55 124 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 E9PSI1 815 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 SORBS3O60504 671 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 POLR3DP05423 398 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-207ENST00000624700 EIF4BP23588 611 aaKnown RBP7.05□□□□□ -1.28
CDKL5-207ENST00000624700 VAMP1P23763 118 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 KRTAP1-3Q8IUG1 177 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 EPS8L3Q8TE67 593 aaKnown RBP7.05□□□□□ -1.28
CDKL5-207ENST00000624700 KRTAP4-12Q9BQ66 201 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 NPHS2Q9NP85 383 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 TRIM33Q9UPN9 1127 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 PPME1Q9Y570 386 aa7.05□□□□□ -1.28
CDKL5-207ENST00000624700 PDE2AO00408 941 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-207ENST00000624700 GLB1P16278 677 aa7.04□□□□□ -1.28
CDKL5-207ENST00000624700 COL13A1Q5TAT6 717 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-207ENST00000624700 PEAR1Q5VY43 1037 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-207ENST00000624700 NXPE3Q969Y0 559 aa7.04□□□□□ -1.28
CDKL5-207ENST00000624700 LIN7BQ9HAP6 207 aa7.04□□□□□ -1.28
CDKL5-207ENST00000624700 FAM8A1Q9UBU6 413 aa7.04□□□□□ -1.28
CDKL5-207ENST00000624700 PTPRAP18433 802 aa7.03□□□□□ -1.28
CDKL5-207ENST00000624700 PTPN12Q05209 780 aaKnown RBP7.03□□□□□ -1.28
CDKL5-207ENST00000624700 PRPF40BQ6NWY9 871 aaKnown RBP7.03□□□□□ -1.28
CDKL5-207ENST00000624700 CCNJLQ8IV13 435 aa7.03□□□□□ -1.28
CDKL5-207ENST00000624700 AGGF1Q8N302 714 aaeCLIP7.03□□□□□ -1.28
CDKL5-207ENST00000624700 BCO2Q9BYV7 579 aa7.03□□□□□ -1.28
CDKL5-207ENST00000624700 BHLHE41Q9C0J9 482 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-207ENST00000624700 C12orf49Q9H741 205 aa7.03□□□□□ -1.28
CDKL5-207ENST00000624700 GSTT1P30711 240 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 SSTR4P31391 388 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 RBM25P49756 843 aaKnown RBP7.02□□□□□ -1.29
CDKL5-207ENST00000624700 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 CEP135Q66GS9 1140 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.02□□□□□ -1.29
CDKL5-207ENST00000624700 ZKSCAN3Q9BRR0 538 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 ADAM19Q9H013 955 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 RASSF4Q9H2L5 321 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 RAXQ9Y2V3 346 aa7.02□□□□□ -1.29
CDKL5-207ENST00000624700 LINC01387J3KSC0 135 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 NFKBIEO00221 500 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 GSC2O15499 205 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 CD97P48960 835 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 CABP4P57796 275 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
CDKL5-207ENST00000624700 GRM2Q14416 872 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 MCTP1Q6DN14 999 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 NPM2Q86SE8 214 aaKnown RBP7.01□□□□□ -1.29
CDKL5-207ENST00000624700 GALNT11Q8NCW6 608 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 BSNDQ8WZ55 320 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 MRRFQ96E11 262 aaKnown RBP7.01□□□□□ -1.29
CDKL5-207ENST00000624700 STOML1Q9UBI4 398 aa7.01□□□□□ -1.29
CDKL5-207ENST00000624700 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 CD68P34810 354 aaPredicted RBP7□□□□□ -1.29
CDKL5-207ENST00000624700 RPS26P11Q5JNZ5 115 aaPredicted RBP7□□□□□ -1.29
CDKL5-207ENST00000624700 NXPE4Q6UWF7 544 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms