RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 ZNF827Q17R98 1081 aa12.49□□□□□ -0.41
ATRX-216ENST00000624403 CCDC158Q5M9N0 1113 aa12.49□□□□□ -0.41
ATRX-216ENST00000624403 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
ATRX-216ENST00000624403 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
ATRX-216ENST00000624403 FAM227BQ96M60 508 aa12.49□□□□□ -0.41
ATRX-216ENST00000624403 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
ATRX-216ENST00000624403 GOLIM4O00461 696 aa12.48□□□□□ -0.41
ATRX-216ENST00000624403 EPB41L2O43491 1005 aaKnown RBP12.48□□□□□ -0.41
ATRX-216ENST00000624403 MCCP23508 829 aa12.48□□□□□ -0.41
ATRX-216ENST00000624403 ANKRD18AQ8IVF6 992 aa12.48□□□□□ -0.41
ATRX-216ENST00000624403 SNX21Q969T3 373 aa12.48□□□□□ -0.41
ATRX-216ENST00000624403 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
ATRX-216ENST00000624403 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
ATRX-216ENST00000624403 TNS1Q9HBL0 1735 aaKnown RBP12.48□□□□□ -0.41
ATRX-216ENST00000624403 RAD50Q92878 1312 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 A0A0D9SFI3 127 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 NPHP1O15259 732 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 TAF5LO75529 589 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 SLC5A1P13866 664 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 TM4SF1P30408 202 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 SCARF1Q14162 830 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 RABEP1Q15276 862 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 KIAA1211Q6ZU35 1233 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 CNBD1Q8NA66 436 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
ATRX-216ENST00000624403 LPIN2Q92539 896 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 SNRKQ9NRH2 765 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 TFCP2L1Q9NZI6 479 aa12.47□□□□□ -0.41
ATRX-216ENST00000624403 CHRNDQ07001 517 aa12.46□□□□□ -0.41
ATRX-216ENST00000624403 PRR5LQ6MZQ0 368 aa12.46□□□□□ -0.41
ATRX-216ENST00000624403 HSCBQ8IWL3 235 aa12.46□□□□□ -0.41
ATRX-216ENST00000624403 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
ATRX-216ENST00000624403 ZNF512BQ96KM6 892 aaPredicted RBP12.46□□□□□ -0.41
ATRX-216ENST00000624403 BSDC1Q9NW68 430 aaPredicted RBP12.46□□□□□ -0.41
ATRX-216ENST00000624403 PALD1Q9ULE6 856 aa12.46□□□□□ -0.41
ATRX-216ENST00000624403 MED23Q9ULK4 1368 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
ATRX-216ENST00000624403 SNAP23O00161 211 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 SERPINB2P05120 415 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 HSPA4P34932 840 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 ZAP70P43403 619 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 PHKA1P46020 1223 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 ANAPC15P60006 121 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 FKBP4Q02790 459 aaKnown RBP eCLIP12.45□□□□□ -0.42
ATRX-216ENST00000624403 PTH1RQ03431 593 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 DDR1Q08345 913 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 CCDC102BQ68D86 513 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 TICAM2Q86XR7 235 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
ATRX-216ENST00000624403 ZNF687Q8N1G0 1237 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 IL17RAQ96F46 866 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 LHX6Q9UPM6 363 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 SPEF2Q9C093 1822 aa12.45□□□□□ -0.42
ATRX-216ENST00000624403 CCDC171Q6TFL3 1326 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 CASZ1Q86V15 1759 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
ATRX-216ENST00000624403 CD2BP2O95400 341 aaKnown RBP12.44□□□□□ -0.42
ATRX-216ENST00000624403 CHGBP05060 677 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 UQCRFS1P1P0C7P4 283 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
ATRX-216ENST00000624403 MCAMP43121 646 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 RPS8P62241 208 aaKnown RBP12.44□□□□□ -0.42
ATRX-216ENST00000624403 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 LARP6Q9BRS8 491 aaKnown RBP12.44□□□□□ -0.42
ATRX-216ENST00000624403 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 ARAP2Q8WZ64 1704 aa12.44□□□□□ -0.42
ATRX-216ENST00000624403 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
ATRX-216ENST00000624403 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
ATRX-216ENST00000624403 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
ATRX-216ENST00000624403 ST5P78524 1137 aa12.43□□□□□ -0.42
ATRX-216ENST00000624403 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
ATRX-216ENST00000624403 FLAD1Q8NFF5 587 aa12.43□□□□□ -0.42
ATRX-216ENST00000624403 PNPLA7Q6ZV29 1317 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 EZH2Q15910 746 aaKnown RBP12.42□□□□□ -0.42
ATRX-216ENST00000624403 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 MCMDC2Q4G0Z9 681 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 ZMYM1Q5SVZ6 1142 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 SEC62Q99442 399 aaKnown RBP12.42□□□□□ -0.42
ATRX-216ENST00000624403 HELLSQ9NRZ9 838 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
ATRX-216ENST00000624403 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
ATRX-216ENST00000624403 TAF1P21675 1872 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 BCAMP50895 628 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
ATRX-216ENST00000624403 GRAPQ13588 217 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 UBE4AQ14139 1066 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
ATRX-216ENST00000624403 MAP4K1Q92918 833 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 KCNB2Q92953 911 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 ANKRD2Q9GZV1 360 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 PIH1D3Q9NQM4 214 aaKnown RBP12.41□□□□□ -0.42
ATRX-216ENST00000624403 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
ATRX-216ENST00000624403 RBM8AQ9Y5S9 174 aaKnown RBP12.41□□□□□ -0.42
ATRX-216ENST00000624403 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms