RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TBC1D22AQ8WUA7 517 aa15.5■□□□□ 0.07
LINC00963-217ENST00000624009 LPIN2Q92539 896 aa15.5■□□□□ 0.07
LINC00963-217ENST00000624009 ABT1Q9ULW3 272 aaKnown RBP15.5■□□□□ 0.07
LINC00963-217ENST00000624009 COL1A1P02452 1464 aaPredicted RBP15.49■□□□□ 0.07
LINC00963-217ENST00000624009 WNT10BO00744 389 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 MS4A1P11836 297 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 FKBP1BP68106 108 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 USP48Q86UV5 1035 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 VPS37DQ86XT2 251 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 FTSJ3Q8IY81 847 aaKnown RBP15.49■□□□□ 0.07
LINC00963-217ENST00000624009 DZIP1LQ8IYY4 767 aaKnown RBP15.49■□□□□ 0.07
LINC00963-217ENST00000624009 KLHDC4Q8TBB5 520 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 FBXW7Q969H0 707 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 CEP126Q9P2H0 1117 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 MKRN1Q9UHC7 482 aaKnown RBP15.49■□□□□ 0.07
LINC00963-217ENST00000624009 SUGT1Q9Y2Z0 365 aa15.49■□□□□ 0.07
LINC00963-217ENST00000624009 SLC5A1P13866 664 aa15.48■□□□□ 0.07
LINC00963-217ENST00000624009 GYG1P46976 350 aa15.48■□□□□ 0.07
LINC00963-217ENST00000624009 VEGFBP49765 207 aa15.48■□□□□ 0.07
LINC00963-217ENST00000624009 ANGEL2Q5VTE6 544 aaKnown RBP15.48■□□□□ 0.07
LINC00963-217ENST00000624009 KIAA0825Q8IV33 1275 aa15.48■□□□□ 0.07
LINC00963-217ENST00000624009 CERS5Q8N5B7 392 aa15.48■□□□□ 0.07
LINC00963-217ENST00000624009 MXD3Q9BW11 206 aa15.48■□□□□ 0.07
LINC00963-217ENST00000624009 PAPPA2Q9BXP8 1791 aa15.47■□□□□ 0.07
LINC00963-217ENST00000624009 SRGAP3O43295 1099 aa15.47■□□□□ 0.07
LINC00963-217ENST00000624009 FMR1Q06787 632 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC00963-217ENST00000624009 MFSD14BQ5SR56 506 aa15.47■□□□□ 0.07
LINC00963-217ENST00000624009 APOBEC3FQ8IUX4 373 aaKnown RBP15.47■□□□□ 0.07
LINC00963-217ENST00000624009 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
LINC00963-217ENST00000624009 CLUAP1Q96AJ1 413 aa15.47■□□□□ 0.07
LINC00963-217ENST00000624009 MRIQ9BWK5 157 aa15.47■□□□□ 0.07
LINC00963-217ENST00000624009 SERPINA10Q9UK55 444 aa15.47■□□□□ 0.07
LINC00963-217ENST00000624009 WDR33Q9C0J8 1336 aaKnown RBP15.46■□□□□ 0.07
LINC00963-217ENST00000624009 HDLBPQ00341 1268 aaKnown RBP15.46■□□□□ 0.07
LINC00963-217ENST00000624009 DLGAP5Q15398 846 aa15.46■□□□□ 0.07
LINC00963-217ENST00000624009 NBPF9Q3BBW0 867 aa15.46■□□□□ 0.07
LINC00963-217ENST00000624009 C2orf69Q8N8R5 385 aa15.46■□□□□ 0.07
LINC00963-217ENST00000624009 GBA2Q9HCG7 927 aaPredicted RBP15.46■□□□□ 0.07
LINC00963-217ENST00000624009 SEMA3EO15041 775 aa15.45■□□□□ 0.06
LINC00963-217ENST00000624009 MYO1BO43795 1136 aa15.45■□□□□ 0.06
LINC00963-217ENST00000624009 MAP2K2P36507 400 aa15.45■□□□□ 0.06
LINC00963-217ENST00000624009 MAP2K1Q02750 393 aaPredicted RBP15.45■□□□□ 0.06
LINC00963-217ENST00000624009 ATP2B3Q16720 1220 aa15.45■□□□□ 0.06
LINC00963-217ENST00000624009 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
LINC00963-217ENST00000624009 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
LINC00963-217ENST00000624009 PPP2R3BQ9Y5P8 575 aa15.45■□□□□ 0.06
LINC00963-217ENST00000624009 ASTN2O75129 1339 aaPredicted RBP15.44■□□□□ 0.06
LINC00963-217ENST00000624009 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 ADM5C9JUS6 153 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 ZBTB7BO15156 539 aaPredicted RBP15.44■□□□□ 0.06
LINC00963-217ENST00000624009 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 WDR66Q8TBY9 1149 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 CDCA5Q96FF9 252 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 CAPNS2Q96L46 248 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 SIL1Q9H173 461 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 TNNQ9UQP3 1299 aa15.44■□□□□ 0.06
LINC00963-217ENST00000624009 MAST3O60307 1309 aa15.43■□□□□ 0.06
LINC00963-217ENST00000624009 PDS5AQ29RF7 1337 aaKnown RBP15.43■□□□□ 0.06
LINC00963-217ENST00000624009 FRAT2O75474 233 aaPredicted RBP15.43■□□□□ 0.06
LINC00963-217ENST00000624009 BCAMP50895 628 aa15.43■□□□□ 0.06
LINC00963-217ENST00000624009 POLA2Q14181 598 aa15.43■□□□□ 0.06
LINC00963-217ENST00000624009 SSH3Q8TE77 659 aa15.43■□□□□ 0.06
LINC00963-217ENST00000624009 WBP1LQ9NX94 342 aa15.43■□□□□ 0.06
LINC00963-217ENST00000624009 PA2G4Q9UQ80 394 aaKnown RBP15.43■□□□□ 0.06
LINC00963-217ENST00000624009 HSPA1AP0DMV8 641 aaKnown RBP15.42■□□□□ 0.06
LINC00963-217ENST00000624009 HSPA1BP0DMV9 641 aaKnown RBP15.42■□□□□ 0.06
LINC00963-217ENST00000624009 RLBP1P12271 317 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 NF2P35240 595 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 HUNKP57058 714 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 CFAP100Q494V2 611 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 ITPRIPQ8IWB1 547 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
LINC00963-217ENST00000624009 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 TTF2Q9UNY4 1162 aaKnown RBP15.42■□□□□ 0.06
LINC00963-217ENST00000624009 AKAP11Q9UKA4 1901 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 SALL1Q9NSC2 1324 aa15.42■□□□□ 0.06
LINC00963-217ENST00000624009 UNCXA6NJT0 531 aa15.41■□□□□ 0.06
LINC00963-217ENST00000624009 ATP8B2P98198 1209 aa15.41■□□□□ 0.06
LINC00963-217ENST00000624009 NOGQ13253 232 aa15.41■□□□□ 0.06
LINC00963-217ENST00000624009 TNFAIP1Q13829 316 aa15.41■□□□□ 0.06
LINC00963-217ENST00000624009 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
LINC00963-217ENST00000624009 PNMA6EA0A0J9YXQ4 647 aa15.4■□□□□ 0.06
LINC00963-217ENST00000624009 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00963-217ENST00000624009 CYP4F22Q6NT55 531 aa15.4■□□□□ 0.06
LINC00963-217ENST00000624009 RGMBQ6NW40 437 aa15.4■□□□□ 0.06
LINC00963-217ENST00000624009 HHIPL2Q6UWX4 724 aa15.4■□□□□ 0.06
LINC00963-217ENST00000624009 PRMT6Q96LA8 375 aaPredicted RBP15.4■□□□□ 0.06
LINC00963-217ENST00000624009 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
LINC00963-217ENST00000624009 DENND2AQ9ULE3 1009 aa15.4■□□□□ 0.06
LINC00963-217ENST00000624009 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
LINC00963-217ENST00000624009 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 F8W031 263 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-217ENST00000624009 CA12O43570 354 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
LINC00963-217ENST00000624009 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-217ENST00000624009 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-217ENST00000624009 ZGPATQ8N5A5 531 aaKnown RBP15.39■□□□□ 0.05
LINC00963-217ENST00000624009 TEKT1Q969V4 418 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms