RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 LOC105371045A0A1W2PR82 267 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 FYB1O15117 783 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 ECE2O60344 883 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 BBOX1O75936 387 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 USP17L8P0C7I0 530 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 ID4P47928 161 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 TFF2Q03403 129 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 PRKCZQ05513 592 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 CCL15Q16663 113 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 TTC5Q8N0Z6 440 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 BRI3BPQ8WY22 251 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 CNTNAP3BQ96NU0 1288 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 CNTNAP3Q9BZ76 1288 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 FZD1Q9UP38 647 aa8.96□□□□□ -0.98
CDKL5-204ENST00000623364 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 A1BGP04217 495 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 CTGFP29279 349 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 NBPF9Q3BBW0 867 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 C9orf50Q5SZB4 431 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 FAM43AQ8N2R8 423 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 PRKAG2Q9UGJ0 569 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 DACH1Q9UI36 760 aa8.95□□□□□ -0.98
CDKL5-204ENST00000623364 DDX60LQ5H9U9 1706 aaKnown RBP8.94□□□□□ -0.98
CDKL5-204ENST00000623364 HAX1O00165 279 aa8.94□□□□□ -0.98
CDKL5-204ENST00000623364 RIMBP2O15034 1052 aa8.94□□□□□ -0.98
CDKL5-204ENST00000623364 ELNP15502 786 aa8.94□□□□□ -0.98
CDKL5-204ENST00000623364 GTF2A2P52657 109 aa8.94□□□□□ -0.98
CDKL5-204ENST00000623364 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDKL5-204ENST00000623364 FOXD4L1Q9NU39 408 aa8.94□□□□□ -0.98
CDKL5-204ENST00000623364 ZNF318Q5VUA4 2279 aa8.94□□□□□ -0.98
CDKL5-204ENST00000623364 RIF1Q5UIP0 2472 aaKnown RBP8.94□□□□□ -0.98
CDKL5-204ENST00000623364 NCOR2Q9Y618 2525 aa8.94□□□□□ -0.98
CDKL5-204ENST00000623364 FLNBO75369 2602 aaKnown RBP8.94□□□□□ -0.98
CDKL5-204ENST00000623364 ZFHX4Q86UP3 3567 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 MAST4O15021 2626 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 CFAP47Q6ZTR5 3102 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 IGFBP4P22692 258 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 DNAJB2P25686 324 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 IREB2P48200 963 aaKnown RBP8.93□□□□□ -0.98
CDKL5-204ENST00000623364 PTPN5P54829 565 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 RSBN1LQ6PCB5 846 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-204ENST00000623364 APOBEC3FQ8IUX4 373 aaKnown RBP8.93□□□□□ -0.98
CDKL5-204ENST00000623364 PXYLP1Q8TE99 480 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 OPTNQ96CV9 577 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 ZCCHC17Q9NP64 241 aaKnown RBP8.93□□□□□ -0.98
CDKL5-204ENST00000623364 DDX60Q8IY21 1712 aaKnown RBP8.93□□□□□ -0.98
CDKL5-204ENST00000623364 FAM208BQ5VWN6 2430 aa8.93□□□□□ -0.98
CDKL5-204ENST00000623364 PFASO15067 1338 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 ABCC4O15439 1325 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 G3V3G9 751 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 ALADP13716 330 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 FCGRTP55899 365 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 DCAF8Q5TAQ9 597 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 C17orf99Q6UX52 265 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 ANKRD13AQ8IZ07 590 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 PRDM12Q9H4Q4 367 aa8.92□□□□□ -0.98
CDKL5-204ENST00000623364 COL3A1P02461 1466 aaPredicted RBP8.91□□□□□ -0.98
CDKL5-204ENST00000623364 FAM186AA6NE01 2351 aa8.91□□□□□ -0.98
CDKL5-204ENST00000623364 MED19A0JLT2 244 aaPredicted RBP8.91□□□□□ -0.98
CDKL5-204ENST00000623364 U2AF1L5P0DN76 240 aaPredicted RBP8.91□□□□□ -0.98
CDKL5-204ENST00000623364 U2AF1Q01081 240 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDKL5-204ENST00000623364 LRRC26Q2I0M4 334 aa8.91□□□□□ -0.98
CDKL5-204ENST00000623364 TIFAQ96CG3 184 aa8.91□□□□□ -0.98
CDKL5-204ENST00000623364 NLRP3Q96P20 1036 aa8.91□□□□□ -0.98
CDKL5-204ENST00000623364 CPA4Q9UI42 421 aa8.91□□□□□ -0.98
CDKL5-204ENST00000623364 UBR2Q8IWV8 1755 aa8.91□□□□□ -0.98
CDKL5-204ENST00000623364 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 C6orf229H3BNL8 230 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 WNT10BO00744 389 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 ERC2O15083 957 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 EIF4A2Q14240 407 aaKnown RBP8.9□□□□□ -0.98
CDKL5-204ENST00000623364 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
CDKL5-204ENST00000623364 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.98
CDKL5-204ENST00000623364 PODNQ7Z5L7 613 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 EYA3Q99504 573 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 ELP3Q9H9T3 547 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 LGR6Q9HBX8 967 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 GABRQQ9UN88 632 aa8.9□□□□□ -0.98
CDKL5-204ENST00000623364 TLL1O43897 1013 aa8.89□□□□□ -0.99
CDKL5-204ENST00000623364 SUPT20HL1Q3ZLR7 823 aa8.89□□□□□ -0.99
CDKL5-204ENST00000623364 OGFOD1Q8N543 542 aa8.89□□□□□ -0.99
CDKL5-204ENST00000623364 RNPC3Q96LT9 517 aaKnown RBP8.89□□□□□ -0.99
CDKL5-204ENST00000623364 MFSD14AQ96MC6 490 aa8.89□□□□□ -0.99
CDKL5-204ENST00000623364 PUS7Q96PZ0 661 aaKnown RBP8.89□□□□□ -0.99
CDKL5-204ENST00000623364 DUOX1Q9NRD9 1551 aa8.89□□□□□ -0.99
CDKL5-204ENST00000623364 COL1A1P02452 1464 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-204ENST00000623364 DCHS1Q96JQ0 3298 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-204ENST00000623364 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-204ENST00000623364 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 RNMTO43148 476 aaKnown RBP8.88□□□□□ -0.99
CDKL5-204ENST00000623364 CETPP11597 493 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 FLT3LGP49771 235 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 IRF5Q13568 498 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 ADGRE1Q14246 886 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 ST3GAL2Q16842 350 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 C3orf67Q6ZVT6 689 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms