RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NBPF6Q5VWK0 638 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 REXO1L1PQ8IX06 675 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 SMARCE1Q969G3 411 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 NBPF4Q96M43 638 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 CLIC4Q9Y696 253 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 ATP1A3P13637 1013 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 EVCP57679 992 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
LDB3-209ENST00000623056 PSME1Q06323 249 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
LDB3-209ENST00000623056 TNNI3KQ59H18 835 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 MUM1L1Q5H9M0 696 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
LDB3-209ENST00000623056 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 HSD3B7Q9H2F3 369 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 EPC1Q9H2F5 836 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 TMX1Q9H3N1 280 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 FPGT-TNNI3KV9GXZ4 949 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 IGKV5-2P06315 115 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
LDB3-209ENST00000623056 OAS2P29728 719 aaKnown RBP16.34■□□□□ 0.21
LDB3-209ENST00000623056 PDIA3P30101 505 aaKnown RBP16.34■□□□□ 0.21
LDB3-209ENST00000623056 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 EPHA10Q5JZY3 1008 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 CC2D1AQ6P1N0 951 aaPredicted RBP16.34■□□□□ 0.21
LDB3-209ENST00000623056 ABTB2Q8N961 1025 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 KCNG4Q8TDN1 519 aa16.34■□□□□ 0.21
LDB3-209ENST00000623056 ZCCHC17Q9NP64 241 aaKnown RBP16.34■□□□□ 0.21
LDB3-209ENST00000623056 IKBKBO14920 756 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 DDX58O95786 925 aaKnown RBP16.33■□□□□ 0.2
LDB3-209ENST00000623056 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
LDB3-209ENST00000623056 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
LDB3-209ENST00000623056 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 LMO7Q8WWI1 1683 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 ZNF202O95125 648 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 TFCP2Q12800 502 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 SMC1AQ14683 1233 aaKnown RBP16.33■□□□□ 0.2
LDB3-209ENST00000623056 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 KRBA2Q6ZNG9 492 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 DPF2Q92785 391 aa16.33■□□□□ 0.2
LDB3-209ENST00000623056 HEG1Q9ULI3 1381 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 SPTLC2O15270 562 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 YEATS4O95619 227 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 NFATC2IPQ8NCF5 419 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
LDB3-209ENST00000623056 HAUS7Q99871 368 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
LDB3-209ENST00000623056 VWA3AA6NCI4 1184 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 POLR3DP05423 398 aaPredicted RBP16.31■□□□□ 0.2
LDB3-209ENST00000623056 UBASH3AP57075 661 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 GOLGA8FQ08AF8 430 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 GOLGA8DPQ0D2H9 430 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 ISM2Q6H9L7 571 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 DBNDD2Q9BQY9 259 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 E7EWF7 191 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
LDB3-209ENST00000623056 ZSCAN12O43309 604 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 GPS2Q13227 327 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 COPRSQ9NQ92 184 aa16.31■□□□□ 0.2
LDB3-209ENST00000623056 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 PFKFB1P16118 471 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 VSTM4Q8IW00 320 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
LDB3-209ENST00000623056 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
LDB3-209ENST00000623056 DDX21Q9NR30 783 aaKnown RBP eCLIP16.3■□□□□ 0.2
LDB3-209ENST00000623056 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 SERPINC1P01008 464 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 IP6K1Q92551 441 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 MPHOSPH8Q99549 860 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 PPP2R2CQ9Y2T4 447 aa16.3■□□□□ 0.2
LDB3-209ENST00000623056 GCKRQ14397 625 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 TMEM139Q8IV31 216 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 KBTBD3Q8NAB2 608 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 LTN1O94822 1766 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 RFX5P48382 616 aaPredicted RBP16.29■□□□□ 0.2
LDB3-209ENST00000623056 MAP3K9P80192 1104 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 PTPN12Q05209 780 aaKnown RBP16.29■□□□□ 0.2
LDB3-209ENST00000623056 PPP2R3AQ06190 1150 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
LDB3-209ENST00000623056 PDIA6Q15084 440 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 ZSCAN26Q16670 478 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 PTPN21Q16825 1174 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 AXDND1Q5T1B0 1012 aaPredicted RBP16.29■□□□□ 0.2
LDB3-209ENST00000623056 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 C8orf76Q96K31 380 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 WDR24Q96S15 920 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 ARFGAP3Q9NP61 516 aa16.29■□□□□ 0.2
LDB3-209ENST00000623056 MROH7-TTC4A0A0A0MT08 1334 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms