RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ME3Q16798 604 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 HLTFQ14527 1009 aaKnown RBP eCLIP18.44■□□□□ 0.54
GABRB3-215ENST00000622697 MCM6Q14566 821 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 LEO1Q8WVC0 666 aaPredicted RBP18.44■□□□□ 0.54
GABRB3-215ENST00000622697 C19orf44Q9H6X5 657 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 RFC4P35249 363 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 NOP2P46087 812 aaKnown RBP18.43■□□□□ 0.54
GABRB3-215ENST00000622697 FAM160A1Q05DH4 1040 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 KRT222Q8N1A0 295 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 PLBD2Q8NHP8 589 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 CBX8Q9HC52 389 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 CABP5Q9NP86 173 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 AOX1Q06278 1338 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 IBSPP21815 317 aaPredicted RBP18.43■□□□□ 0.54
GABRB3-215ENST00000622697 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 AKR1B10O60218 316 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 GCKRQ14397 625 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 XAGE2Q96GT9 111 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 MYL10Q9BUA6 226 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 BRAPQ7Z569 592 aa18.43■□□□□ 0.54
GABRB3-215ENST00000622697 VPS36Q86VN1 386 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 ALS2CR12Q96Q35 445 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 PICALMQ13492 652 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 ITGA6P23229 1130 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 CTR9Q6PD62 1173 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
GABRB3-215ENST00000622697 SLF2Q8IX21 1173 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
GABRB3-215ENST00000622697 ZNF496Q96IT1 587 aaPredicted RBP18.42■□□□□ 0.54
GABRB3-215ENST00000622697 USP8P40818 1118 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 PRPF4BQ13523 1007 aaKnown RBP18.42■□□□□ 0.54
GABRB3-215ENST00000622697 CUL5Q93034 780 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 RMND1Q9NWS8 449 aa18.42■□□□□ 0.54
GABRB3-215ENST00000622697 SETDB2Q96T68 719 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 ARHGEF5Q12774 1597 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 KIAA0232Q92628 1395 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 SHTN1A0MZ66 631 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 PLCD4Q9BRC7 762 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 ARMT1Q9H993 441 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 MCM9Q9NXL9 1143 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.41■□□□□ 0.54
GABRB3-215ENST00000622697 ASIC1P78348 528 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 GPT2Q8TD30 523 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 CTAGE1Q96RT6 745 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 PYM1Q9BRP8 204 aaKnown RBP18.41■□□□□ 0.54
GABRB3-215ENST00000622697 CLSTN2Q9H4D0 955 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 SLC52A2Q9HAB3 445 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 MCM3P25205 808 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 UNC5CLQ8IV45 518 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 FAM114A1Q8IWE2 563 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 NLRP3Q96P20 1036 aa18.41■□□□□ 0.54
GABRB3-215ENST00000622697 NAPAP54920 295 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 PUF60Q9UHX1 559 aaKnown RBP18.4■□□□□ 0.54
GABRB3-215ENST00000622697 HOXB7P09629 217 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 KRT2P35908 639 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 SEC62Q99442 399 aaKnown RBP18.4■□□□□ 0.54
GABRB3-215ENST00000622697 HSPA2P54652 639 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 IFFO1Q0D2I5 559 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 ZNF174Q15697 407 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 A0A0D9SFI3 127 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 GPAA1O43292 621 aa18.4■□□□□ 0.54
GABRB3-215ENST00000622697 PHKBQ93100 1093 aa18.39■□□□□ 0.54
GABRB3-215ENST00000622697 PLXNC1O60486 1568 aa18.39■□□□□ 0.54
GABRB3-215ENST00000622697 KRI1Q8N9T8 703 aaKnown RBP18.39■□□□□ 0.53
GABRB3-215ENST00000622697 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 ARFGAP3Q9NP61 516 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 SSH3Q8TE77 659 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 MACROD2A1Z1Q3 448 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 CCDC175P0C221 793 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 LTKP29376 864 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
GABRB3-215ENST00000622697 VWA3AA6NCI4 1184 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 POTEB2H3BUK9 544 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 BMP15O95972 392 aa18.39■□□□□ 0.53
GABRB3-215ENST00000622697 TNIP1Q15025 636 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 ANO1Q5XXA6 986 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 CTAGE15A4D2H0 777 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 TAF5LO75529 589 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 KIF20AO95235 890 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 CTAGE8P0CG41 777 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 DDB1Q16531 1140 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 CTAGE6Q86UF2 777 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 CTAGE4Q8IX94 777 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 RIOK3O14730 519 aaKnown RBP18.38■□□□□ 0.53
GABRB3-215ENST00000622697 PRDM1O75626 825 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 ARID5AQ03989 594 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 CAPZA3Q96KX2 299 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 CALCOCO1Q9P1Z2 691 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
GABRB3-215ENST00000622697 WWC2Q6AWC2 1192 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 CTNNBL1Q8WYA6 563 aaPredicted RBP18.38■□□□□ 0.53
GABRB3-215ENST00000622697 TSC1Q92574 1164 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 ARHGEF10O15013 1369 aa18.38■□□□□ 0.53
GABRB3-215ENST00000622697 PSMA7O14818 248 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 DYDC1Q8WWB3 177 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms