RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 ZBTB22O15209 634 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 REC8O95072 547 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 CHGBP05060 677 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 KCNA3P22001 575 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 TGFB2P61812 414 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
CPNE3-212ENST00000621783 TICAM2Q86XR7 235 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 DENND2AQ9ULE3 1009 aa12.88□□□□□ -0.35
CPNE3-212ENST00000621783 RNF113AO15541 343 aaKnown RBP12.87□□□□□ -0.35
CPNE3-212ENST00000621783 C7orf43Q8WVR3 580 aa12.87□□□□□ -0.35
CPNE3-212ENST00000621783 C22orf23Q9BZE7 217 aa12.87□□□□□ -0.35
CPNE3-212ENST00000621783 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
CPNE3-212ENST00000621783 IDH1O75874 414 aaKnown RBP12.86□□□□□ -0.35
CPNE3-212ENST00000621783 LRRFIP1Q32MZ4 808 aaKnown RBP12.86□□□□□ -0.35
CPNE3-212ENST00000621783 SLFNL1Q499Z3 407 aa12.86□□□□□ -0.35
CPNE3-212ENST00000621783 ZMYM1Q5SVZ6 1142 aa12.86□□□□□ -0.35
CPNE3-212ENST00000621783 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
CPNE3-212ENST00000621783 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
CPNE3-212ENST00000621783 TDRD7Q8NHU6 1098 aaKnown RBP12.86□□□□□ -0.35
CPNE3-212ENST00000621783 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.35
CPNE3-212ENST00000621783 ANO2Q9NQ90 1003 aa12.86□□□□□ -0.35
CPNE3-212ENST00000621783 WWC3Q9ULE0 1092 aa12.86□□□□□ -0.35
CPNE3-212ENST00000621783 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
CPNE3-212ENST00000621783 C21orf2O43822 256 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 ZFYP08048 801 aaPredicted RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 ADD2P35612 726 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 RBM25P49756 843 aaKnown RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 WASHC4Q2M389 1173 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 ZSCAN25Q6NSZ9 544 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 USP26Q9BXU7 913 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 RTFDC1Q9BY42 306 aaPredicted RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 LSG1Q9H089 658 aaKnown RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
CPNE3-212ENST00000621783 MAST3O60307 1309 aa12.85□□□□□ -0.35
CPNE3-212ENST00000621783 M0R2C6 588 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 IL1R1P14778 569 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 PDE6AP16499 860 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 MAP3K12Q12852 859 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 MCMDC2Q4G0Z9 681 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 APPBP2Q92624 585 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 EYA3Q99504 573 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 CD209Q9NNX6 404 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 CCDC171Q6TFL3 1326 aa12.84□□□□□ -0.35
CPNE3-212ENST00000621783 TCRBV5S4A2TA0A5A2 114 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.36
CPNE3-212ENST00000621783 UBE3CQ15386 1083 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 KIAA1211Q6ZU35 1233 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 OSBP2Q969R2 916 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 ZC3H12CQ9C0D7 883 aaKnown RBP12.83□□□□□ -0.36
CPNE3-212ENST00000621783 COA1Q9GZY4 146 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 ABCF2Q9UG63 623 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 ZNF532Q9HCE3 1301 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 SALL1Q9NSC2 1324 aa12.83□□□□□ -0.36
CPNE3-212ENST00000621783 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
CPNE3-212ENST00000621783 ANP32AP39687 249 aaKnown RBP12.82□□□□□ -0.36
CPNE3-212ENST00000621783 PTH1RQ03431 593 aa12.82□□□□□ -0.36
CPNE3-212ENST00000621783 GRIPAP1Q4V328 841 aa12.82□□□□□ -0.36
CPNE3-212ENST00000621783 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
CPNE3-212ENST00000621783 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
CPNE3-212ENST00000621783 MAGEB6Q8N7X4 407 aa12.82□□□□□ -0.36
CPNE3-212ENST00000621783 SUPT20HQ8NEM7 779 aa12.82□□□□□ -0.36
CPNE3-212ENST00000621783 WDR66Q8TBY9 1149 aa12.82□□□□□ -0.36
CPNE3-212ENST00000621783 FER1L6Q2WGJ9 1857 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 MCCP23508 829 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 RTKN2Q8IZC4 609 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 ZGPATQ8N5A5 531 aaKnown RBP12.81□□□□□ -0.36
CPNE3-212ENST00000621783 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 PUS7LQ9H0K6 701 aaKnown RBP12.81□□□□□ -0.36
CPNE3-212ENST00000621783 RAI14Q9P0K7 980 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
CPNE3-212ENST00000621783 CHD4Q14839 1912 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 PRDX5P30044 214 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 AOC3Q16853 763 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 ERICH6Q7L0X2 663 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 PSMD1Q99460 953 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 KIF2CQ99661 725 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 FAM205AQ6ZU69 1335 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 COL4A5P29400 1685 aa12.8□□□□□ -0.36
CPNE3-212ENST00000621783 G3V3G9 751 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 GPAA1O43292 621 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 ECE2O60344 883 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms