RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 CAPN15O75808 1086 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 ATP8B2P98198 1209 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 PDE3AQ14432 1141 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 CEP85Q6P2H3 762 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 KIAA0825Q8IV33 1275 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 TNS4Q8IZW8 715 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
COL8A1-208ENST00000621757 IQSEC3Q9UPP2 1182 aaPredicted RBP14.93□□□□□ -0.02
COL8A1-208ENST00000621757 COL1A1P02452 1464 aaPredicted RBP14.93□□□□□ -0.02
COL8A1-208ENST00000621757 SASH1O94885 1247 aa14.92□□□□□ -0.02
COL8A1-208ENST00000621757 BCAMP50895 628 aa14.92□□□□□ -0.02
COL8A1-208ENST00000621757 TFCP2Q12800 502 aa14.92□□□□□ -0.02
COL8A1-208ENST00000621757 ZC3H15Q8WU90 426 aaKnown RBP14.92□□□□□ -0.02
COL8A1-208ENST00000621757 MYOZ2Q9NPC6 264 aa14.92□□□□□ -0.02
COL8A1-208ENST00000621757 PGAP2Q9UHJ9 254 aa14.92□□□□□ -0.02
COL8A1-208ENST00000621757 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.92□□□□□ -0.02
COL8A1-208ENST00000621757 PCNTO95613 3336 aa14.92□□□□□ -0.02
COL8A1-208ENST00000621757 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
COL8A1-208ENST00000621757 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
COL8A1-208ENST00000621757 TRPM7Q96QT4 1865 aa14.91□□□□□ -0.02
COL8A1-208ENST00000621757 TRAF5O00463 557 aa14.91□□□□□ -0.02
COL8A1-208ENST00000621757 FKBP1AP62942 108 aaKnown RBP14.91□□□□□ -0.02
COL8A1-208ENST00000621757 OGFOD1Q8N543 542 aa14.91□□□□□ -0.02
COL8A1-208ENST00000621757 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
COL8A1-208ENST00000621757 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
COL8A1-208ENST00000621757 GGA3Q9NZ52 723 aa14.91□□□□□ -0.02
COL8A1-208ENST00000621757 MKRN1Q9UHC7 482 aaKnown RBP14.91□□□□□ -0.02
COL8A1-208ENST00000621757 F8W031 263 aaPredicted RBP14.9□□□□□ -0.02
COL8A1-208ENST00000621757 ADORA1P30542 326 aa14.9□□□□□ -0.02
COL8A1-208ENST00000621757 RRP1P56182 461 aaKnown RBP14.9□□□□□ -0.02
COL8A1-208ENST00000621757 FMR1Q06787 632 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL8A1-208ENST00000621757 CHAF1AQ13111 956 aaPredicted RBP14.9□□□□□ -0.02
COL8A1-208ENST00000621757 G3BP1Q13283 466 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL8A1-208ENST00000621757 MFSD14BQ5SR56 506 aa14.9□□□□□ -0.02
COL8A1-208ENST00000621757 GLIS2Q9BZE0 524 aaPredicted RBP14.9□□□□□ -0.02
COL8A1-208ENST00000621757 POLR2AP24928 1970 aaKnown RBP14.89□□□□□ -0.03
COL8A1-208ENST00000621757 A0A1B0GUL7 405 aa14.89□□□□□ -0.03
COL8A1-208ENST00000621757 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
COL8A1-208ENST00000621757 SCARF1Q14162 830 aa14.89□□□□□ -0.03
COL8A1-208ENST00000621757 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
COL8A1-208ENST00000621757 ECM29Q5VYK3 1845 aa14.89□□□□□ -0.03
COL8A1-208ENST00000621757 SURF6O75683 361 aaKnown RBP14.88□□□□□ -0.03
COL8A1-208ENST00000621757 PHKA1P46020 1223 aa14.88□□□□□ -0.03
COL8A1-208ENST00000621757 OS9Q13438 667 aaPredicted RBP14.88□□□□□ -0.03
COL8A1-208ENST00000621757 ANGEL2Q5VTE6 544 aaKnown RBP14.88□□□□□ -0.03
COL8A1-208ENST00000621757 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
COL8A1-208ENST00000621757 AKAP2Q9Y2D5 859 aa14.88□□□□□ -0.03
COL8A1-208ENST00000621757 TMEM88BA6NKF7 163 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 ADM5C9JUS6 153 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 WNT10BO00744 389 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 MMP14P50281 582 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 TIMM10P62072 90 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 NBPF9Q3BBW0 867 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 CDC37L1Q7L3B6 337 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 KRT26Q7Z3Y9 468 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 DCPSQ96C86 337 aaKnown RBP14.87□□□□□ -0.03
COL8A1-208ENST00000621757 XAGE2Q96GT9 111 aa14.87□□□□□ -0.03
COL8A1-208ENST00000621757 NOP58Q9Y2X3 529 aaKnown RBP14.87□□□□□ -0.03
COL8A1-208ENST00000621757 GRIK5Q16478 980 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 CCDC102BQ68D86 513 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 DLK2Q6UY11 383 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 USP48Q86UV5 1035 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 ZBED3Q96IU2 234 aaPredicted RBP14.86□□□□□ -0.03
COL8A1-208ENST00000621757 GNL3LQ9NVN8 582 aaKnown RBP14.86□□□□□ -0.03
COL8A1-208ENST00000621757 TTF2Q9UNY4 1162 aaKnown RBP14.86□□□□□ -0.03
COL8A1-208ENST00000621757 EXOC6BQ9Y2D4 811 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 PCDHAC2Q9Y5I4 1007 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 PITPNM2Q9BZ72 1349 aa14.86□□□□□ -0.03
COL8A1-208ENST00000621757 CNTNAP1P78357 1384 aa14.85□□□□□ -0.03
COL8A1-208ENST00000621757 DLGAP5Q15398 846 aa14.85□□□□□ -0.03
COL8A1-208ENST00000621757 CFAP100Q494V2 611 aa14.85□□□□□ -0.03
COL8A1-208ENST00000621757 SULF1Q8IWU6 871 aa14.85□□□□□ -0.03
COL8A1-208ENST00000621757 RPAP2Q8IXW5 612 aaPredicted RBP14.85□□□□□ -0.03
COL8A1-208ENST00000621757 NEUROD6Q96NK8 337 aa14.85□□□□□ -0.03
COL8A1-208ENST00000621757 ZNF408Q9H9D4 720 aa14.85□□□□□ -0.03
COL8A1-208ENST00000621757 SCAF8Q9UPN6 1271 aaKnown RBP14.85□□□□□ -0.03
COL8A1-208ENST00000621757 SEMA3EO15041 775 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 HMMRO75330 724 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 CELF2O95319 508 aaKnown RBP14.84□□□□□ -0.03
COL8A1-208ENST00000621757 RASGRF1Q13972 1273 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 TNNI3KQ59H18 835 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 CST9Q5W186 159 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 MTMR14Q8NCE2 650 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 GPR108Q9NPR9 543 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 FPGT-TNNI3KV9GXZ4 949 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 AOX1Q06278 1338 aa14.84□□□□□ -0.03
COL8A1-208ENST00000621757 SPDYE2BA6NHP3 402 aa14.83□□□□□ -0.04
COL8A1-208ENST00000621757 FOXN1O15353 648 aa14.83□□□□□ -0.04
COL8A1-208ENST00000621757 SPDYE6P0CI01 402 aa14.83□□□□□ -0.04
COL8A1-208ENST00000621757 RBM5P52756 815 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL8A1-208ENST00000621757 WDR66Q8TBY9 1149 aa14.83□□□□□ -0.04
COL8A1-208ENST00000621757 SERPINA10Q9UK55 444 aa14.83□□□□□ -0.04
COL8A1-208ENST00000621757 DENND2AQ9ULE3 1009 aa14.83□□□□□ -0.04
COL8A1-208ENST00000621757 ZBTB22O15209 634 aa14.82□□□□□ -0.04
COL8A1-208ENST00000621757 CRKP46108 304 aa14.82□□□□□ -0.04
COL8A1-208ENST00000621757 VEGFBP49765 207 aa14.82□□□□□ -0.04
COL8A1-208ENST00000621757 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms