RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 SMC2O95347 1197 aa10.21□□□□□ -0.78
TRIM6-212ENST00000621176 HAND2P61296 217 aa10.21□□□□□ -0.78
TRIM6-212ENST00000621176 ZNF771Q7L3S4 317 aaPredicted RBP10.21□□□□□ -0.78
TRIM6-212ENST00000621176 TMC6Q7Z403 805 aa10.21□□□□□ -0.78
TRIM6-212ENST00000621176 RAB11FIP4Q86YS3 637 aa10.21□□□□□ -0.78
TRIM6-212ENST00000621176 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.78
TRIM6-212ENST00000621176 LRRN4CLQ8ND94 238 aa10.21□□□□□ -0.78
TRIM6-212ENST00000621176 ZNF594Q96JF6 807 aaPredicted RBP10.21□□□□□ -0.78
TRIM6-212ENST00000621176 ABCC6O95255 1503 aa10.21□□□□□ -0.78
TRIM6-212ENST00000621176 RNF113AO15541 343 aaKnown RBP10.2□□□□□ -0.78
TRIM6-212ENST00000621176 SLU7O95391 586 aaKnown RBP10.2□□□□□ -0.78
TRIM6-212ENST00000621176 GABPB1Q06547 395 aaPredicted RBP10.2□□□□□ -0.78
TRIM6-212ENST00000621176 STK38Q15208 465 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
TRIM6-212ENST00000621176 PPP1R13BQ96KQ4 1090 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 IMPACTQ9P2X3 320 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 LMTK3Q96Q04 1460 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 IFIT1P09914 478 aaKnown RBP10.2□□□□□ -0.78
TRIM6-212ENST00000621176 EVCP57679 992 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 NCAPHQ15003 741 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 ISM2Q6H9L7 571 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 PLBD2Q8NHP8 589 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 ZNF446Q9NWS9 450 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 FAM53CQ9NYF3 392 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 SCN11AQ9UI33 1791 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 FER1L4A9Z1Z3 1794 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 KIF28PB7ZC32 967 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 H7C1W4 665 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 SPTLC2O15270 562 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 CYP27B1O15528 508 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 ZNF202O95125 648 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 ERCC6LQ2NKX8 1250 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 SYT10Q6XYQ8 523 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 KRT222Q8N1A0 295 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 FBXO18Q8NFZ0 1043 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 C8orf76Q96K31 380 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
TRIM6-212ENST00000621176 A0A1B0GUL7 405 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 SLC3A2P08195 630 aaKnown RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 KRT28Q7Z3Y7 464 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 ANKLE2Q86XL3 938 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 IFNL2Q8IZJ0 200 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 KCNG4Q8TDN1 519 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 BPIFA3Q9BQP9 254 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 PUS3Q9BZE2 481 aaKnown RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 L2HGDHQ9H9P8 463 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 ST7Q9NRC1 585 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 ARFGEF2Q9Y6D5 1785 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 MEGF6O75095 1541 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 NBPF26B4DH59 902 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 ATP1A3P13637 1013 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 TATP17735 454 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 LMOD1P29536 600 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 TERF2Q15554 542 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 ZRSR1Q15695 479 aaKnown RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 AXDND1Q5T1B0 1012 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 NBPF14Q5TI25 921 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 NBPF10Q6P3W6 841 aaKnown RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 FBXL16Q8N461 479 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 NBPF15Q8N660 670 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 HSD3B7Q9H2F3 369 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 GPR108Q9NPR9 543 aa10.19□□□□□ -0.78
TRIM6-212ENST00000621176 ORC3Q9UBD5 711 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-212ENST00000621176 YEATS4O95619 227 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 SFPQP23246 707 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRIM6-212ENST00000621176 IL15P40933 162 aaPredicted RBP10.18□□□□□ -0.78
TRIM6-212ENST00000621176 FKBP4Q02790 459 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRIM6-212ENST00000621176 CCDC93Q567U6 631 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 TTLL7Q6ZT98 887 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 KLF18A0A0U1RQI7 1052 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 KIF2AO00139 706 aaPredicted RBP10.18□□□□□ -0.78
TRIM6-212ENST00000621176 WDHD1O75717 1129 aaPredicted RBP10.18□□□□□ -0.78
TRIM6-212ENST00000621176 FGAP02671 866 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 PFKFB1P16118 471 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 NLRP12P59046 1061 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 HSP90AB3PQ58FF7 597 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 MROH7-TTC4A0A0A0MT08 1334 aa10.18□□□□□ -0.78
TRIM6-212ENST00000621176 GOLGA8BA8MQT2 603 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 EYA2O00167 538 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 PRC1O43663 620 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 MARCKSP29966 332 aaPredicted RBP10.17□□□□□ -0.78
TRIM6-212ENST00000621176 ANTXR2P58335 489 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 CCDC150Q8NCX0 1101 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 DCAF5Q96JK2 942 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 PSDA5PKW4 1024 aaPredicted RBP10.17□□□□□ -0.78
TRIM6-212ENST00000621176 MB21D2Q8IYB1 491 aaPredicted RBP10.17□□□□□ -0.78
TRIM6-212ENST00000621176 H2AFXP16104 143 aaPredicted RBP10.17□□□□□ -0.78
TRIM6-212ENST00000621176 FANCCQ00597 558 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 KIF23Q02241 960 aaPredicted RBP10.17□□□□□ -0.78
TRIM6-212ENST00000621176 PTPN21Q16825 1174 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 WASHC4Q2M389 1173 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 ANO1Q5XXA6 986 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 SYNE3Q6ZMZ3 975 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 BRAPQ7Z569 592 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 DPF2Q92785 391 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 AIFM3Q96NN9 605 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 DENND2AQ9ULE3 1009 aa10.17□□□□□ -0.78
TRIM6-212ENST00000621176 NWD2Q9ULI1 1742 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms