RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 SOX17Q9H6I2 414 aaPredicted RBP6.93□□□□□ -1.3
CCDC144B-209ENST00000621104 LIN7BQ9HAP6 207 aa6.93□□□□□ -1.3
CCDC144B-209ENST00000621104 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
CCDC144B-209ENST00000621104 SEC31BQ9NQW1 1179 aa6.93□□□□□ -1.3
CCDC144B-209ENST00000621104 FOXD4L6Q3SYB3 417 aaPredicted RBP6.92□□□□□ -1.3
CCDC144B-209ENST00000621104 PRPF40BQ6NWY9 871 aaKnown RBP6.92□□□□□ -1.3
CCDC144B-209ENST00000621104 FOXD4L3Q6VB84 417 aaPredicted RBP6.92□□□□□ -1.3
CCDC144B-209ENST00000621104 Q6ZS46 218 aa6.92□□□□□ -1.3
CCDC144B-209ENST00000621104 VN1R5Q7Z5H4 357 aa6.92□□□□□ -1.3
CCDC144B-209ENST00000621104 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 ARL4DP49703 201 aa6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 PTPN12Q05209 780 aaKnown RBP6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 FMR1Q06787 632 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 IKBKEQ14164 716 aa6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 ENOX2Q16206 610 aaKnown RBP6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 AEBP1Q8IUX7 1158 aa6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 SSBP4Q9BWG4 385 aaPredicted RBP6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 AKTIPQ9H8T0 292 aa6.91□□□□□ -1.3
CCDC144B-209ENST00000621104 A0A096LPE4 126 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 A0A1W2PPZ6 126 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 ITPKAP23677 461 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 NOS3P29474 1203 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 PLCB3Q01970 1234 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 C19orf57Q0VDD7 668 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 FBF1Q8TES7 1133 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 CARD10Q9BWT7 1032 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 EHD4Q9H223 541 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.3
CCDC144B-209ENST00000621104 ESRRAP11474 423 aaPredicted RBP6.89□□□□□ -1.31
CCDC144B-209ENST00000621104 GRIA4P48058 902 aa6.89□□□□□ -1.31
CCDC144B-209ENST00000621104 DZIP1LQ8IYY4 767 aaKnown RBP6.89□□□□□ -1.31
CCDC144B-209ENST00000621104 FOXD4L4Q8WXT5 416 aaPredicted RBP6.89□□□□□ -1.31
CCDC144B-209ENST00000621104 PNMA6FA0A0J9YX94 578 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 METTL12A8MUP2 240 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 SOX1O00570 391 aaPredicted RBP6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 ADAM11O75078 769 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 H2AFB1P0C5Y9 115 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 H2AFB2P0C5Z0 115 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 CDC25BP30305 580 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 IREB2P48200 963 aaKnown RBP6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 DOC2BQ14184 412 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 NKAPLQ5M9Q1 402 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 KLHDC7BQ96G42 594 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 ABCB6Q9NP58 842 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 KCNK4Q9NYG8 393 aa6.88□□□□□ -1.31
CCDC144B-209ENST00000621104 K7ELQ4 463 aaPredicted RBP6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 WISP1O95388 367 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 GRM2Q14416 872 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 DUOXA2Q1HG44 320 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 RSPO4Q2I0M5 234 aaPredicted RBP6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 RPS26P11Q5JNZ5 115 aaPredicted RBP6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 ACAD11Q709F0 780 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 SLC7A3Q8WY07 619 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 ZFYVE1Q9HBF4 777 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 NLRP2Q9NX02 1062 aa6.87□□□□□ -1.31
CCDC144B-209ENST00000621104 B3GALT4O96024 378 aa6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 XRCC5P13010 732 aaKnown RBP6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 PCDH1Q08174 1060 aa6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 UVSSAQ2YD98 709 aa6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 ALG1LQ6GMV1 187 aa6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 EPS8L3Q8TE67 593 aaKnown RBP6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 MEGF10Q96KG7 1140 aa6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 CEP41Q9BYV8 373 aa6.86□□□□□ -1.31
CCDC144B-209ENST00000621104 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 FURINP09958 794 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 SPRED3Q2MJR0 410 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 UBASH3BQ8TF42 649 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 SRCIN1Q9C0H9 1055 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 RNF208Q9H0X6 261 aa6.85□□□□□ -1.31
CCDC144B-209ENST00000621104 MEGF11A6BM72 1044 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 DDX3YO15523 660 aaKnown RBP6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 DYRK3O43781 588 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 MAPK8P45983 427 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 NLRP12P59046 1061 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 FGD1P98174 961 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 HGSNATQ68CP4 663 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 AGGF1Q8N302 714 aaeCLIP6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 DDX54Q8TDD1 881 aaKnown RBP6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 TP53INP1Q96A56 240 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 NRSN2Q9GZP1 204 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
CCDC144B-209ENST00000621104 GIPC1O14908 333 aa6.83□□□□□ -1.32
CCDC144B-209ENST00000621104 ALX3O95076 343 aa6.83□□□□□ -1.32
CCDC144B-209ENST00000621104 GLB1P16278 677 aa6.83□□□□□ -1.32
CCDC144B-209ENST00000621104 ZNF423Q2M1K9 1284 aa6.83□□□□□ -1.32
CCDC144B-209ENST00000621104 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCDC144B-209ENST00000621104 HP1BP3Q5SSJ5 553 aaPredicted RBP6.83□□□□□ -1.32
CCDC144B-209ENST00000621104 ANKRD34AQ69YU3 496 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms