RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 ABCC5O15440 1437 aa13.07□□□□□ -0.32
MALAT1-217ENST00000620902 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
MALAT1-217ENST00000620902 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
MALAT1-217ENST00000620902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.07□□□□□ -0.32
MALAT1-217ENST00000620902 GDF2Q9UK05 429 aaPredicted RBP13.07□□□□□ -0.32
MALAT1-217ENST00000620902 EFSO43281 561 aa13.06□□□□□ -0.32
MALAT1-217ENST00000620902 RTN1Q16799 776 aa13.06□□□□□ -0.32
MALAT1-217ENST00000620902 SUSD3Q96L08 255 aa13.06□□□□□ -0.32
MALAT1-217ENST00000620902 C2CD2LO14523 706 aa13.05□□□□□ -0.32
MALAT1-217ENST00000620902 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
MALAT1-217ENST00000620902 VTI1AQ96AJ9 217 aa13.05□□□□□ -0.32
MALAT1-217ENST00000620902 MARK1Q9P0L2 795 aa13.05□□□□□ -0.32
MALAT1-217ENST00000620902 ADAMTS8Q9UP79 889 aa13.05□□□□□ -0.32
MALAT1-217ENST00000620902 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
MALAT1-217ENST00000620902 XPCQ01831 940 aaPredicted RBP13.04□□□□□ -0.32
MALAT1-217ENST00000620902 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.04□□□□□ -0.32
MALAT1-217ENST00000620902 SLC52A1Q9NWF4 448 aa13.04□□□□□ -0.32
MALAT1-217ENST00000620902 NRAPQ86VF7 1730 aa13.04□□□□□ -0.32
MALAT1-217ENST00000620902 CD33P20138 364 aa13.03□□□□□ -0.32
MALAT1-217ENST00000620902 GOLGA6L1Q8N7Z2 621 aa13.03□□□□□ -0.32
MALAT1-217ENST00000620902 OIP5O43482 229 aa13.02□□□□□ -0.33
MALAT1-217ENST00000620902 TSPY4P0CV99 314 aa13.02□□□□□ -0.33
MALAT1-217ENST00000620902 TSPY10P0CW01 314 aa13.02□□□□□ -0.33
MALAT1-217ENST00000620902 ARAFP10398 606 aa13.02□□□□□ -0.33
MALAT1-217ENST00000620902 TMEM164Q5U3C3 297 aa13.02□□□□□ -0.33
MALAT1-217ENST00000620902 HSH2DQ96JZ2 352 aa13.02□□□□□ -0.33
MALAT1-217ENST00000620902 AVENQ9NQS1 362 aaPredicted RBP13.02□□□□□ -0.33
MALAT1-217ENST00000620902 HCN2Q9UL51 889 aa13.02□□□□□ -0.33
MALAT1-217ENST00000620902 ZNF280CQ8ND82 737 aa13.01□□□□□ -0.33
MALAT1-217ENST00000620902 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
MALAT1-217ENST00000620902 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
MALAT1-217ENST00000620902 ADCY9O60503 1353 aa13.01□□□□□ -0.33
MALAT1-217ENST00000620902 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
MALAT1-217ENST00000620902 STRN4Q9NRL3 753 aa13□□□□□ -0.33
MALAT1-217ENST00000620902 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
MALAT1-217ENST00000620902 PRMT3O60678 531 aa12.99□□□□□ -0.33
MALAT1-217ENST00000620902 OCLNQ16625 522 aa12.99□□□□□ -0.33
MALAT1-217ENST00000620902 IER5Q5VY09 327 aa12.99□□□□□ -0.33
MALAT1-217ENST00000620902 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
MALAT1-217ENST00000620902 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 HSPA1AP0DMV8 641 aaKnown RBP12.98□□□□□ -0.33
MALAT1-217ENST00000620902 HSPA1BP0DMV9 641 aaKnown RBP12.98□□□□□ -0.33
MALAT1-217ENST00000620902 MARSP56192 900 aaKnown RBP12.98□□□□□ -0.33
MALAT1-217ENST00000620902 KCNQ4P56696 695 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 HTRA3P83110 453 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 SLCO4C1Q6ZQN7 724 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 CLP1Q92989 425 aaKnown RBP12.98□□□□□ -0.33
MALAT1-217ENST00000620902 MYO19Q96H55 970 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 BRD7Q9NPI1 651 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 GGA1Q9UJY5 639 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
MALAT1-217ENST00000620902 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
MALAT1-217ENST00000620902 TYRO3Q06418 890 aa12.97□□□□□ -0.33
MALAT1-217ENST00000620902 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
MALAT1-217ENST00000620902 BTLAQ7Z6A9 289 aa12.97□□□□□ -0.33
MALAT1-217ENST00000620902 GALNT6Q8NCL4 622 aa12.97□□□□□ -0.33
MALAT1-217ENST00000620902 NEDD1Q8NHV4 660 aa12.97□□□□□ -0.33
MALAT1-217ENST00000620902 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.33
MALAT1-217ENST00000620902 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.33
MALAT1-217ENST00000620902 TGFBR3LH3BV60 316 aa12.96□□□□□ -0.33
MALAT1-217ENST00000620902 ADH6P28332 368 aa12.96□□□□□ -0.33
MALAT1-217ENST00000620902 SFSWAPQ12872 951 aaKnown RBP12.96□□□□□ -0.33
MALAT1-217ENST00000620902 EDARADDQ8WWZ3 215 aa12.96□□□□□ -0.33
MALAT1-217ENST00000620902 COL26A1Q96A83 441 aa12.96□□□□□ -0.33
MALAT1-217ENST00000620902 DNMT3AQ9Y6K1 912 aaPredicted RBP12.96□□□□□ -0.33
MALAT1-217ENST00000620902 SPATA31A3Q5VYP0 1347 aa12.95□□□□□ -0.34
MALAT1-217ENST00000620902 C11orf91Q3C1V1 193 aa12.95□□□□□ -0.34
MALAT1-217ENST00000620902 ZNF468Q5VIY5 522 aaPredicted RBP12.95□□□□□ -0.34
MALAT1-217ENST00000620902 CXXC1Q9P0U4 656 aaPredicted RBP12.95□□□□□ -0.34
MALAT1-217ENST00000620902 KCNH4Q9UQ05 1017 aa12.95□□□□□ -0.34
MALAT1-217ENST00000620902 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
MALAT1-217ENST00000620902 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
MALAT1-217ENST00000620902 KANK1Q14678 1352 aa12.94□□□□□ -0.34
MALAT1-217ENST00000620902 LMTK2Q8IWU2 1503 aa12.94□□□□□ -0.34
MALAT1-217ENST00000620902 DUOX2Q9NRD8 1548 aa12.94□□□□□ -0.34
MALAT1-217ENST00000620902 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
MALAT1-217ENST00000620902 RNF225M0QZC1 329 aaPredicted RBP12.94□□□□□ -0.34
MALAT1-217ENST00000620902 MLLT1Q03111 559 aaPredicted RBP12.94□□□□□ -0.34
MALAT1-217ENST00000620902 SCARF2Q96GP6 870 aaPredicted RBP12.94□□□□□ -0.34
MALAT1-217ENST00000620902 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
MALAT1-217ENST00000620902 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
MALAT1-217ENST00000620902 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
MALAT1-217ENST00000620902 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
MALAT1-217ENST00000620902 DGKZQ13574 1117 aa12.93□□□□□ -0.34
MALAT1-217ENST00000620902 C1orf229Q6ZS94 237 aaPredicted RBP12.93□□□□□ -0.34
MALAT1-217ENST00000620902 BTG4Q9NY30 223 aa12.93□□□□□ -0.34
MALAT1-217ENST00000620902 KLK14Q9P0G3 267 aa12.93□□□□□ -0.34
MALAT1-217ENST00000620902 BCS1LQ9Y276 419 aa12.93□□□□□ -0.34
MALAT1-217ENST00000620902 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
MALAT1-217ENST00000620902 TOMM70O94826 608 aa12.92□□□□□ -0.34
MALAT1-217ENST00000620902 EPXP11678 715 aa12.92□□□□□ -0.34
MALAT1-217ENST00000620902 DMGDHQ9UI17 866 aaKnown RBP12.92□□□□□ -0.34
MALAT1-217ENST00000620902 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
MALAT1-217ENST00000620902 KLF15Q9UIH9 416 aa12.91□□□□□ -0.34
MALAT1-217ENST00000620902 METP08581 1390 aa12.91□□□□□ -0.34
MALAT1-217ENST00000620902 SPEM2Q0P670 501 aa12.9□□□□□ -0.34
MALAT1-217ENST00000620902 KCNMA1Q12791 1236 aa12.9□□□□□ -0.34
MALAT1-217ENST00000620902 EFCC1Q9HA90 598 aa12.9□□□□□ -0.34
MALAT1-217ENST00000620902 PDE4DIPQ5VU43 2346 aa12.9□□□□□ -0.34
MALAT1-217ENST00000620902 SHISA8B8ZZ34 492 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms