RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 C1orf167Q5SNV9 1468 aa23.78■■□□□ 1.4
NEK3-208ENST00000618534 EYA2O00167 538 aa23.78■■□□□ 1.4
NEK3-208ENST00000618534 LINC00301Q8NCQ3 95 aa23.78■■□□□ 1.4
NEK3-208ENST00000618534 A0A1W2PQ27 194 aa23.78■■□□□ 1.4
NEK3-208ENST00000618534 A0A1W2PQ64 194 aa23.78■■□□□ 1.4
NEK3-208ENST00000618534 A0A1W2PQD8 194 aa23.78■■□□□ 1.4
NEK3-208ENST00000618534 CCAR2Q8N163 923 aaKnown RBP23.78■■□□□ 1.4
NEK3-208ENST00000618534 OGFRQ9NZT2 677 aa23.78■■□□□ 1.4
NEK3-208ENST00000618534 MST1RQ04912 1400 aa23.77■■□□□ 1.4
NEK3-208ENST00000618534 HAND2P61296 217 aa23.77■■□□□ 1.4
NEK3-208ENST00000618534 DPCR1Q3MIW9 517 aa23.77■■□□□ 1.4
NEK3-208ENST00000618534 TICAM2Q86XR7 235 aa23.77■■□□□ 1.4
NEK3-208ENST00000618534 EVCP57679 992 aa23.76■■□□□ 1.39
NEK3-208ENST00000618534 STK38Q15208 465 aa23.76■■□□□ 1.39
NEK3-208ENST00000618534 NWD2Q9ULI1 1742 aa23.76■■□□□ 1.39
NEK3-208ENST00000618534 POLR3DP05423 398 aaPredicted RBP23.76■■□□□ 1.39
NEK3-208ENST00000618534 SF3A1Q15459 793 aaKnown RBP23.76■■□□□ 1.39
NEK3-208ENST00000618534 PUS3Q9BZE2 481 aaKnown RBP23.76■■□□□ 1.39
NEK3-208ENST00000618534 KIAA1468Q9P260 1216 aa23.76■■□□□ 1.39
NEK3-208ENST00000618534 ZNF215Q9UL58 517 aaPredicted RBP23.76■■□□□ 1.39
NEK3-208ENST00000618534 NEDD4P46934 1319 aa23.76■■□□□ 1.39
NEK3-208ENST00000618534 FOXP2O15409 715 aa23.75■■□□□ 1.39
NEK3-208ENST00000618534 FBXL16Q8N461 479 aa23.75■■□□□ 1.39
NEK3-208ENST00000618534 CHMP4CQ96CF2 233 aa23.75■■□□□ 1.39
NEK3-208ENST00000618534 C8orf76Q96K31 380 aa23.75■■□□□ 1.39
NEK3-208ENST00000618534 COL18A1P39060 1754 aa23.75■■□□□ 1.39
NEK3-208ENST00000618534 SPEF2Q9C093 1822 aa23.75■■□□□ 1.39
NEK3-208ENST00000618534 GSDMDP57764 484 aa23.75■■□□□ 1.39
NEK3-208ENST00000618534 FKBP4Q02790 459 aaKnown RBP eCLIP23.75■■□□□ 1.39
NEK3-208ENST00000618534 NUP188Q5SRE5 1749 aa23.74■■□□□ 1.39
NEK3-208ENST00000618534 OSBPL5Q9H0X9 879 aaPredicted RBP23.74■■□□□ 1.39
NEK3-208ENST00000618534 PKD1L3Q7Z443 1732 aa23.74■■□□□ 1.39
NEK3-208ENST00000618534 CHRNA2Q15822 529 aa23.74■■□□□ 1.39
NEK3-208ENST00000618534 RAB11FIP4Q86YS3 637 aa23.74■■□□□ 1.39
NEK3-208ENST00000618534 KCNG4Q8TDN1 519 aa23.74■■□□□ 1.39
NEK3-208ENST00000618534 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
NEK3-208ENST00000618534 GJB4Q9NTQ9 266 aa23.74■■□□□ 1.39
NEK3-208ENST00000618534 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.74■■□□□ 1.39
NEK3-208ENST00000618534 V9GYY5 206 aaPredicted RBP23.74■■□□□ 1.39
NEK3-208ENST00000618534 TMEM94Q12767 1356 aa23.74■■□□□ 1.39
NEK3-208ENST00000618534 DDX41Q9UJV9 622 aaKnown RBP23.73■■□□□ 1.39
NEK3-208ENST00000618534 KLF18A0A0U1RQI7 1052 aa23.73■■□□□ 1.39
NEK3-208ENST00000618534 GOLGA8BA8MQT2 603 aa23.73■■□□□ 1.39
NEK3-208ENST00000618534 ZRSR1Q15695 479 aaKnown RBP23.73■■□□□ 1.39
NEK3-208ENST00000618534 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
NEK3-208ENST00000618534 XPO4Q9C0E2 1151 aaKnown RBP23.73■■□□□ 1.39
NEK3-208ENST00000618534 ZBTB3Q9H5J0 574 aa23.73■■□□□ 1.39
NEK3-208ENST00000618534 KCND1Q9NSA2 647 aa23.73■■□□□ 1.39
NEK3-208ENST00000618534 POLR3EQ9NVU0 708 aa23.73■■□□□ 1.39
NEK3-208ENST00000618534 HPS5Q9UPZ3 1129 aa23.73■■□□□ 1.39
NEK3-208ENST00000618534 SPTLC2O15270 562 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 PRC1O43663 620 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 YEATS4O95619 227 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 WASHC4Q2M389 1173 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 MYSM1Q5VVJ2 828 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 PROSER2Q86WR7 435 aaPredicted RBP23.72■■□□□ 1.39
NEK3-208ENST00000618534 FBXO18Q8NFZ0 1043 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 ORC3Q9UBD5 711 aaPredicted RBP23.72■■□□□ 1.39
NEK3-208ENST00000618534 BIN1O00499 593 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 CIAO1O76071 339 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 SMC2O95347 1197 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 IMMTQ16891 758 aaKnown RBP23.72■■□□□ 1.39
NEK3-208ENST00000618534 IFNKQ9P0W0 207 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 IMPACTQ9P2X3 320 aa23.72■■□□□ 1.39
NEK3-208ENST00000618534 HSP90AB3PQ58FF7 597 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 KIF18AQ8NI77 898 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.71■■□□□ 1.39
NEK3-208ENST00000618534 BPIFA3Q9BQP9 254 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 KIF28PB7ZC32 967 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 IGSF3O75054 1194 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 A1BGP04217 495 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 TRHP20396 242 aaPredicted RBP23.71■■□□□ 1.39
NEK3-208ENST00000618534 ADORA1P30542 326 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 TMC6Q7Z403 805 aa23.71■■□□□ 1.39
NEK3-208ENST00000618534 MB21D2Q8IYB1 491 aaPredicted RBP23.71■■□□□ 1.39
NEK3-208ENST00000618534 FGAP02671 866 aa23.7■■□□□ 1.38
NEK3-208ENST00000618534 SLC3A2P08195 630 aaKnown RBP23.7■■□□□ 1.38
NEK3-208ENST00000618534 ANTXR2P58335 489 aa23.7■■□□□ 1.38
NEK3-208ENST00000618534 E4F1Q66K89 784 aaPredicted RBP23.7■■□□□ 1.38
NEK3-208ENST00000618534 ARMCX5Q6P1M9 558 aa23.7■■□□□ 1.38
NEK3-208ENST00000618534 CEP126Q9P2H0 1117 aa23.7■■□□□ 1.38
NEK3-208ENST00000618534 ADAMTSL3P82987 1691 aa23.69■■□□□ 1.38
NEK3-208ENST00000618534 ZNF202O95125 648 aa23.69■■□□□ 1.38
NEK3-208ENST00000618534 KMT5BQ4FZB7 885 aa23.69■■□□□ 1.38
NEK3-208ENST00000618534 TTC39AQ5SRH9 613 aa23.69■■□□□ 1.38
NEK3-208ENST00000618534 BRAPQ7Z569 592 aa23.69■■□□□ 1.38
NEK3-208ENST00000618534 CCDC191Q8NCU4 936 aa23.69■■□□□ 1.38
NEK3-208ENST00000618534 ZNF397Q8NF99 534 aaPredicted RBP23.69■■□□□ 1.38
NEK3-208ENST00000618534 ERO1AQ96HE7 468 aa23.69■■□□□ 1.38
NEK3-208ENST00000618534 DHX16O60231 1041 aaKnown RBP23.69■■□□□ 1.38
NEK3-208ENST00000618534 NLRP12P59046 1061 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 SCARF1Q14162 830 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 ELF2Q15723 593 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 GORABQ5T7V8 394 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 CCDC150Q8NCX0 1101 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 ATG3Q9NT62 314 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 MROH7-TTC4A0A0A0MT08 1334 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 CPLX1O14810 134 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 CCDC158Q5M9N0 1113 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 AXDND1Q5T1B0 1012 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms