RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 DHX32Q7L7V1 743 aaKnown RBP17.44■□□□□ 0.38
SRRT-217ENST00000618411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
SRRT-217ENST00000618411 APOBRQ0VD83 1088 aa17.43■□□□□ 0.38
SRRT-217ENST00000618411 TMEM139Q8IV31 216 aa17.43■□□□□ 0.38
SRRT-217ENST00000618411 TLR7Q9NYK1 1049 aaKnown RBP17.43■□□□□ 0.38
SRRT-217ENST00000618411 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
SRRT-217ENST00000618411 ZNF202O95125 648 aa17.43■□□□□ 0.38
SRRT-217ENST00000618411 SERPINC1P01008 464 aa17.43■□□□□ 0.38
SRRT-217ENST00000618411 TOP1P11387 765 aaKnown RBP17.43■□□□□ 0.38
SRRT-217ENST00000618411 STK38Q15208 465 aa17.43■□□□□ 0.38
SRRT-217ENST00000618411 COL15A1P39059 1388 aa17.43■□□□□ 0.38
SRRT-217ENST00000618411 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
SRRT-217ENST00000618411 LRRC2Q9BYS8 371 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 CFAP100Q494V2 611 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 KIFC2Q96AC6 838 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 ZFP91Q96JP5 570 aaPredicted RBP17.42■□□□□ 0.38
SRRT-217ENST00000618411 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 POLR3EQ9NVU0 708 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 MYL5Q02045 173 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 DPF2Q92785 391 aa17.42■□□□□ 0.38
SRRT-217ENST00000618411 TOPAZ1Q8N9V7 1692 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 RFX7Q2KHR2 1363 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 STX10O60499 249 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 HDXQ7Z353 690 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
SRRT-217ENST00000618411 POTEB2H3BUK9 544 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 SPTLC2O15270 562 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 TTC31Q49AM3 519 aaPredicted RBP17.41■□□□□ 0.38
SRRT-217ENST00000618411 VPS18Q9P253 973 aa17.41■□□□□ 0.38
SRRT-217ENST00000618411 RICTORQ6R327 1708 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 GUCY2CP25092 1073 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 USP5P45974 858 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 BAG1Q99933 345 aaPredicted RBP17.4■□□□□ 0.38
SRRT-217ENST00000618411 PTPRUQ92729 1446 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
SRRT-217ENST00000618411 CMA1P23946 247 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 BEND6Q5SZJ8 279 aaPredicted RBP17.4■□□□□ 0.38
SRRT-217ENST00000618411 TUBE1Q9UJT0 475 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 JRKLQ9Y4A0 524 aa17.4■□□□□ 0.38
SRRT-217ENST00000618411 CEMIPQ8WUJ3 1361 aa17.39■□□□□ 0.38
SRRT-217ENST00000618411 TUBB4BP68371 445 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 CCT2P78371 535 aaKnown RBP17.39■□□□□ 0.37
SRRT-217ENST00000618411 EXOSC10Q01780 885 aaKnown RBP17.39■□□□□ 0.37
SRRT-217ENST00000618411 STOX1Q6ZVD7 989 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 DHX58Q96C10 678 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
SRRT-217ENST00000618411 SEC62Q99442 399 aaKnown RBP17.39■□□□□ 0.37
SRRT-217ENST00000618411 PDE11AQ9HCR9 933 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 CLIC4Q9Y696 253 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 CARMIL3Q8ND23 1372 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 ATP5JP18859 108 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 MCMDC2Q4G0Z9 681 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
SRRT-217ENST00000618411 RAB21Q9UL25 225 aa17.39■□□□□ 0.37
SRRT-217ENST00000618411 ANXA1P04083 346 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 TBX2Q13207 712 aaPredicted RBP17.38■□□□□ 0.37
SRRT-217ENST00000618411 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 UTYO14607 1347 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 ERLIN1O75477 346 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 SRGAP1Q7Z6B7 1085 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
SRRT-217ENST00000618411 KAZALD1Q96I82 304 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 TSPOAP1O95153 1857 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 EIF3CLB5ME19 914 aaKnown RBP17.38■□□□□ 0.37
SRRT-217ENST00000618411 CHMP4BP1P59074 171 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 SUCLG2Q96I99 432 aa17.38■□□□□ 0.37
SRRT-217ENST00000618411 EIF3CQ99613 913 aaKnown RBP17.38■□□□□ 0.37
SRRT-217ENST00000618411 NCOA5Q9HCD5 579 aaKnown RBP17.38■□□□□ 0.37
SRRT-217ENST00000618411 ZNF609O15014 1411 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 GRM8O00222 908 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 PFKFB1P16118 471 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 PDIA3P30101 505 aaKnown RBP17.37■□□□□ 0.37
SRRT-217ENST00000618411 GOLGA8FQ08AF8 430 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 GOLGA8DPQ0D2H9 430 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 MCM6Q14566 821 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
SRRT-217ENST00000618411 PACS2Q86VP3 889 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 ZBTB9Q96C00 473 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
SRRT-217ENST00000618411 TMEM232C9JQI7 657 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 BRAPQ7Z569 592 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 TEX2Q8IWB9 1127 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 MSANTD4Q8NCY6 345 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 L1RE1Q9UN81 338 aa17.37■□□□□ 0.37
SRRT-217ENST00000618411 CUTAO60888 179 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
SRRT-217ENST00000618411 CORO7P57737 925 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
SRRT-217ENST00000618411 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 TUBB2AQ13885 445 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 CWF19L2Q2TBE0 894 aaKnown RBP17.36■□□□□ 0.37
SRRT-217ENST00000618411 CCDC129Q6ZRS4 1044 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 CEP112Q8N8E3 955 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 LINS1Q8NG48 757 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 TUBB2BQ9BVA1 445 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 ANKZF1Q9H8Y5 726 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms